Monthly Archives: November 2011

FixLocal problem solved – new release now available

The most recent build of AllPathsLG contains an obscure bug fix.  Several users reported a failure in FixLocal — a segmentation fault — that we had not seen.  The problem was traced to the behavior of the pthreads library in … Continue reading

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Squirrel Monkey assembly released

The ALLPATHS-LG assembly of Squirrel Monkey (Samiri boliviensis) is now available via NCBI and the Broad Institute ftp site. The basic statistics and location are given below: Contig N50 (kb) Scaffold N50 (Mb) NCBI Accession # Broad FTP 38.8 18.7 AGCE00000000 squirrelmonkey Please read our … Continue reading

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