Monthly Archives: March 2013

Golden Hamster assembly released

Posted on March 31, 2013 by AllpathsIain

The ALLPATHS-LG assembly of Golden Hamster (Mesocricetus auratus) is now available via NCBI and the Broad Institute ftp site. The basic statistics and location are given below: Contig N50 (kb) Scaffold N50 (Mb) NCBI Accession # Broad FTP 22.5 12.8 APMT00000000 MesAur1.0 Please read our release terms … Continue reading →

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Weddell Seal assembly released

Posted on March 31, 2013 by AllpathsIain

The ALLPATHS-LG assembly of Weddell Seal (Leptonychotes weddellii) is now available via NCBI and the Broad Institute ftp site. The basic statistics and location are given below: Contig N50 (kb) Scaffold N50 (Mb) NCBI Accession # Broad FTP 23.7 0.9 APMU00000000 LepWed1.0 Please read our release terms … Continue reading →

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Assessing assembly methods

Posted on March 15, 2013 by AllpathsIain

For purposes of assessing our assembly methods, we generated some NA12878 clone reference sequences.  We believe that these data will be of interest to the community and have therefore decided to make them available to all. These clone sequences and the … Continue reading →

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