Browse Gene Sets

Gene set name:

 

By first letter:

 

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By collection:

[about the MSigDB collections]

  • H (hallmark gene sets, 50 gene sets)
  • C1 (positional gene sets, 299 gene sets)
  • C2 (curated gene sets, 5501 gene sets)
    • CGP (chemical and genetic perturbations, 3302 gene sets)
    • CP (Canonical pathways, 2199 gene sets)
    • CP:BIOCARTA (BioCarta gene sets, 289 gene sets)
    • CP:KEGG (KEGG gene sets, 186 gene sets)
    • CP:PID (PID gene sets, 196 gene sets)
    • CP:REACTOME (Reactome gene sets, 1499 gene sets)
  • C3 (motif gene sets, 831 gene sets)
    • MIR (microRNA targets, 221 gene sets)
    • TFT (transcription factor targets, 610 gene sets)
  • C4 (computational gene sets, 858 gene sets)
    • CGN (cancer gene neighborhoods, 427 gene sets)
    • CM (cancer modules, 431 gene sets)
  • C5 (GO gene sets, 9996 gene sets)
    • BP (GO biological process, 7350 gene sets)
    • CC (GO cellular component, 1001 gene sets)
    • MF (GO molecular function, 1645 gene sets)
  • C6 (oncogenic signatures, 189 gene sets)
  • C7 (immunologic signatures, 4872 gene sets)

Click on a gene set name to view its gene set page.

PID_A6B1_A6B4_INTEGRIN_PATHWAY
PID_AJDISS_2PATHWAY
PID_ALK1_PATHWAY
PID_ALK2_PATHWAY
PID_ALPHA_SYNUCLEIN_PATHWAY
PID_AMB2_NEUTROPHILS_PATHWAY
PID_ANGIOPOIETIN_RECEPTOR_PATHWAY
PID_ANTHRAX_PATHWAY
PID_AP1_PATHWAY
PID_AR_NONGENOMIC_PATHWAY
PID_AR_PATHWAY
PID_AR_TF_PATHWAY
PID_ARF6_DOWNSTREAM_PATHWAY
PID_ARF6_PATHWAY
PID_ARF6_TRAFFICKING_PATHWAY
PID_ARF_3PATHWAY
PID_ATF2_PATHWAY
PID_ATM_PATHWAY
PID_ATR_PATHWAY
PID_AURORA_A_PATHWAY
PID_AURORA_B_PATHWAY
PID_AVB3_INTEGRIN_PATHWAY
PID_AVB3_OPN_PATHWAY
PID_BARD1_PATHWAY
PID_BCR_5PATHWAY
PID_BETA_CATENIN_DEG_PATHWAY
PID_BETA_CATENIN_NUC_PATHWAY
PID_BMP_PATHWAY
PID_CASPASE_PATHWAY
PID_CD40_PATHWAY
PID_CD8_TCR_DOWNSTREAM_PATHWAY
PID_CD8_TCR_PATHWAY
PID_CDC42_PATHWAY
PID_CDC42_REG_PATHWAY
PID_CERAMIDE_PATHWAY
PID_CIRCADIAN_PATHWAY
PID_CMYB_PATHWAY
PID_CONE_PATHWAY
PID_CXCR3_PATHWAY
PID_CXCR4_PATHWAY
PID_DELTA_NP63_PATHWAY
PID_DNA_PK_PATHWAY
PID_E2F_PATHWAY
PID_ECADHERIN_KERATINOCYTE_PATHWAY
PID_ECADHERIN_NASCENT_AJ_PATHWAY
PID_ECADHERIN_STABILIZATION_PATHWAY
PID_ENDOTHELIN_PATHWAY
PID_EPHA2_FWD_PATHWAY
PID_EPHA_FWDPATHWAY
PID_EPHB_FWD_PATHWAY
PID_EPHRINB_REV_PATHWAY
PID_EPO_PATHWAY
PID_ER_NONGENOMIC_PATHWAY
PID_ERA_GENOMIC_PATHWAY
PID_ERB_GENOMIC_PATHWAY
PID_ERBB1_DOWNSTREAM_PATHWAY
PID_ERBB1_INTERNALIZATION_PATHWAY
PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY
PID_ERBB2_ERBB3_PATHWAY
PID_ERBB4_PATHWAY
PID_ERBB_NETWORK_PATHWAY
PID_FAK_PATHWAY
PID_FANCONI_PATHWAY
PID_FAS_PATHWAY
PID_FCER1_PATHWAY
PID_FGF_PATHWAY
PID_FOXM1_PATHWAY
PID_FOXO_PATHWAY
PID_FRA_PATHWAY
PID_GLYPICAN_1PATHWAY
PID_GMCSF_PATHWAY
PID_HDAC_CLASSI_PATHWAY
PID_HDAC_CLASSII_PATHWAY
PID_HDAC_CLASSIII_PATHWAY
PID_HEDGEHOG_2PATHWAY
PID_HEDGEHOG_GLI_PATHWAY
PID_HES_HEY_PATHWAY
PID_HIF1_TFPATHWAY
PID_HIF1A_PATHWAY
PID_HIF2PATHWAY
PID_HIV_NEF_PATHWAY
PID_HNF3A_PATHWAY
PID_HNF3B_PATHWAY
PID_IFNG_PATHWAY
PID_IGF1_PATHWAY
PID_IL12_2PATHWAY
PID_IL12_STAT4_PATHWAY
PID_IL1_PATHWAY
PID_IL23_PATHWAY
PID_IL27_PATHWAY
PID_IL2_1PATHWAY
PID_IL2_PI3K_PATHWAY
PID_IL2_STAT5_PATHWAY
PID_IL3_PATHWAY
PID_IL4_2PATHWAY
PID_IL5_PATHWAY
PID_IL6_7_PATHWAY
PID_IL8_CXCR1_PATHWAY
PID_IL8_CXCR2_PATHWAY
PID_ILK_PATHWAY
PID_INSULIN_GLUCOSE_PATHWAY
PID_INSULIN_PATHWAY
PID_INTEGRIN1_PATHWAY
PID_INTEGRIN2_PATHWAY
PID_INTEGRIN3_PATHWAY
PID_INTEGRIN4_PATHWAY
PID_INTEGRIN5_PATHWAY
PID_INTEGRIN_A4B1_PATHWAY
PID_INTEGRIN_A9B1_PATHWAY
PID_INTEGRIN_CS_PATHWAY
PID_KIT_PATHWAY
PID_LIS1_PATHWAY
PID_LKB1_PATHWAY
PID_LPA4_PATHWAY
PID_LYMPH_ANGIOGENESIS_PATHWAY
PID_LYSOPHOSPHOLIPID_PATHWAY
PID_MAPK_TRK_PATHWAY
PID_MET_PATHWAY
PID_MTOR_4PATHWAY
PID_MYC_ACTIV_PATHWAY
PID_MYC_PATHWAY
PID_MYC_REPRESS_PATHWAY
PID_NCADHERIN_PATHWAY
PID_NECTIN_PATHWAY
PID_NEPHRIN_NEPH1_PATHWAY
PID_NETRIN_PATHWAY
PID_NFAT_3PATHWAY
PID_NFAT_TFPATHWAY
PID_NFKAPPAB_ATYPICAL_PATHWAY
PID_NFKAPPAB_CANONICAL_PATHWAY
PID_NOTCH_PATHWAY
PID_P38_ALPHA_BETA_DOWNSTREAM_PATHW
AY

PID_P38_ALPHA_BETA_PATHWAY
PID_P38_GAMMA_DELTA_PATHWAY
PID_P38_MK2_PATHWAY
PID_P38_MKK3_6PATHWAY
PID_P53_DOWNSTREAM_PATHWAY
PID_P53_REGULATION_PATHWAY
PID_P73PATHWAY
PID_P75_NTR_PATHWAY
PID_PDGFRA_PATHWAY
PID_PDGFRB_PATHWAY
PID_PI3K_PLC_TRK_PATHWAY
PID_PI3KCI_AKT_PATHWAY
PID_PI3KCI_PATHWAY
PID_PLK1_PATHWAY
PID_PRL_SIGNALING_EVENTS_PATHWAY
PID_PS1_PATHWAY
PID_PTP1B_PATHWAY
PID_RAC1_PATHWAY
PID_RAC1_REG_PATHWAY
PID_RANBP2_PATHWAY
PID_RAS_PATHWAY
PID_RB_1PATHWAY
PID_REELIN_PATHWAY
PID_REG_GR_PATHWAY
PID_RET_PATHWAY
PID_RETINOIC_ACID_PATHWAY
PID_RHOA_PATHWAY
PID_RHOA_REG_PATHWAY
PID_RHODOPSIN_PATHWAY
PID_RXR_VDR_PATHWAY
PID_S1P_META_PATHWAY
PID_S1P_S1P1_PATHWAY
PID_S1P_S1P2_PATHWAY
PID_S1P_S1P3_PATHWAY
PID_S1P_S1P4_PATHWAY
PID_SHP2_PATHWAY
PID_SMAD2_3NUCLEAR_PATHWAY
PID_SMAD2_3PATHWAY
PID_SYNDECAN_1_PATHWAY
PID_SYNDECAN_2_PATHWAY
PID_SYNDECAN_3_PATHWAY
PID_SYNDECAN_4_PATHWAY
PID_TAP63_PATHWAY
PID_TCPTP_PATHWAY
PID_TCR_CALCIUM_PATHWAY
PID_TCR_JNK_PATHWAY
PID_TCR_PATHWAY
PID_TCR_RAS_PATHWAY
PID_TELOMERASE_PATHWAY
PID_TGFBR_PATHWAY
PID_THROMBIN_PAR1_PATHWAY
PID_THROMBIN_PAR4_PATHWAY
PID_TNF_PATHWAY
PID_TOLL_ENDOGENOUS_PATHWAY
PID_TRAIL_PATHWAY
PID_TRKR_PATHWAY
PID_TXA2PATHWAY
PID_UPA_UPAR_PATHWAY
PID_VEGF_VEGFR_PATHWAY
PID_VEGFR1_2_PATHWAY
PID_VEGFR1_PATHWAY
PID_WNT_CANONICAL_PATHWAY
PID_WNT_NONCANONICAL_PATHWAY
PID_WNT_SIGNALING_PATHWAY