Browse Gene Sets

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By collection:

[about the MSigDB collections]

  • H (hallmark gene sets, 50 gene sets)
  • C1 (positional gene sets, 326 gene sets)
  • C2 (curated gene sets, 4762 gene sets)
    • CGP (chemical and genetic perturbations, 3433 gene sets)
    • CP (Canonical pathways, 1329 gene sets)
    • CP:BIOCARTA (BioCarta gene sets, 217 gene sets)
    • CP:KEGG (KEGG gene sets, 186 gene sets)
    • CP:REACTOME (Reactome gene sets, 674 gene sets)
  • C3 (motif gene sets, 836 gene sets)
    • MIR (microRNA targets, 221 gene sets)
    • TFT (transcription factor targets, 615 gene sets)
  • C4 (computational gene sets, 858 gene sets)
    • CGN (cancer gene neighborhoods, 427 gene sets)
    • CM (cancer modules, 431 gene sets)
  • C5 (GO gene sets, 5917 gene sets)
    • BP (GO biological process, 4436 gene sets)
    • CC (GO cellular component, 580 gene sets)
    • MF (GO molecular function, 901 gene sets)
  • C6 (oncogenic signatures, 189 gene sets)
  • C7 (immunologic signatures, 4872 gene sets)

Gene sets starting with F

Click on a gene set name to view its gene set page.

FAC1_01
FAELT_B_CLL_WITH_VH3_21_DN
FAELT_B_CLL_WITH_VH3_21_UP
FAELT_B_CLL_WITH_VH_REARRANGEMENTS_
DN

FAELT_B_CLL_WITH_VH_REARRANGEMENTS_
UP

FALVELLA_SMOKERS_WITH_LUNG_CANCER
FARDIN_HYPOXIA_11
FARDIN_HYPOXIA_9
FARMER_BREAST_CANCER_APOCRINE_VS_BA
SAL

FARMER_BREAST_CANCER_APOCRINE_VS_LU
MINAL

FARMER_BREAST_CANCER_BASAL_VS_LULMI
NAL

FARMER_BREAST_CANCER_CLUSTER_1
FARMER_BREAST_CANCER_CLUSTER_2
FARMER_BREAST_CANCER_CLUSTER_3
FARMER_BREAST_CANCER_CLUSTER_4
FARMER_BREAST_CANCER_CLUSTER_5
FARMER_BREAST_CANCER_CLUSTER_6
FARMER_BREAST_CANCER_CLUSTER_7
FARMER_BREAST_CANCER_CLUSTER_8
FATTY_ACID_BETA_OXIDATION
FATTY_ACID_METABOLIC_PROCESS
FATTY_ACID_OXIDATION
FEEDING_BEHAVIOR
FERNANDEZ_BOUND_BY_MYC
FERRANDO_HOX11_NEIGHBORS
FERRANDO_LYL1_NEIGHBORS
FERRANDO_T_ALL_WITH_MLL_ENL_FUSION_
DN

FERRANDO_T_ALL_WITH_MLL_ENL_FUSION_
UP

FERRANDO_TAL1_NEIGHBORS
FERRARI_RESPONSE_TO_FENRETINIDE_DN
FERRARI_RESPONSE_TO_FENRETINIDE_UP
FERREIRA_EWINGS_SARCOMA_UNSTABLE_VS
_STABLE_DN

FERREIRA_EWINGS_SARCOMA_UNSTABLE_VS
_STABLE_UP

FEVR_CTNNB1_TARGETS_DN
FEVR_CTNNB1_TARGETS_UP
FIGUEROA_AML_METHYLATION_CLUSTER_1_
DN

FIGUEROA_AML_METHYLATION_CLUSTER_1_
UP

FIGUEROA_AML_METHYLATION_CLUSTER_2_
DN

FIGUEROA_AML_METHYLATION_CLUSTER_2_
UP

FIGUEROA_AML_METHYLATION_CLUSTER_3_
DN

FIGUEROA_AML_METHYLATION_CLUSTER_3_
UP

FIGUEROA_AML_METHYLATION_CLUSTER_4_
DN

FIGUEROA_AML_METHYLATION_CLUSTER_4_
UP

FIGUEROA_AML_METHYLATION_CLUSTER_5_
DN

FIGUEROA_AML_METHYLATION_CLUSTER_5_
UP

FIGUEROA_AML_METHYLATION_CLUSTER_6_
DN

FIGUEROA_AML_METHYLATION_CLUSTER_6_
UP

FIGUEROA_AML_METHYLATION_CLUSTER_7_
DN

FIGUEROA_AML_METHYLATION_CLUSTER_7_
UP

FINAK_BREAST_CANCER_SDPP_SIGNATURE
FINETTI_BREAST_CANCER_KINOME_GREEN
FINETTI_BREAST_CANCER_KINOME_RED
FINETTI_BREAST_CANCERS_KINOME_BLUE
FINETTI_BREAST_CANCERS_KINOME_GRAY
FIRESTEIN_CTNNB1_PATHWAY
FIRESTEIN_CTNNB1_PATHWAY_AND_PROLIF
ERATION

FIRESTEIN_PROLIFERATION
FISCHER_DIRECT_P53_TARGETS_META_ANA
LYSIS

FISCHER_DREAM_TARGETS
FISCHER_G1_S_CELL_CYCLE
FISCHER_G2_M_CELL_CYCLE
FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_O
K_VS_DONOR_DN

FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_O
K_VS_DONOR_UP

FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_R
EJECTED_VS_OK_DN

FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_R
EJECTED_VS_OK_UP

FLECHNER_PBL_KIDNEY_TRANSPLANT_OK_V
S_DONOR_DN

FLECHNER_PBL_KIDNEY_TRANSPLANT_OK_V
S_DONOR_UP

FLECHNER_PBL_KIDNEY_TRANSPLANT_REJE
CTED_VS_OK_DN

FLECHNER_PBL_KIDNEY_TRANSPLANT_REJE
CTED_VS_OK_UP

FLORIO_HUMAN_NEOCORTEX
FLORIO_NEOCORTEX_BASAL_RADIAL_GLIA_
DN

FLORIO_NEOCORTEX_BASAL_RADIAL_GLIA_
UP

FLOTHO_PEDIATRIC_ALL_THERAPY_RESPON
SE_DN

FLOTHO_PEDIATRIC_ALL_THERAPY_RESPON
SE_UP

FOCAL_ADHESION
FOCAL_ADHESION_FORMATION
FONTAINE_FOLLICULAR_THYROID_ADENOMA
_DN

FONTAINE_FOLLICULAR_THYROID_ADENOMA
_UP

FONTAINE_PAPILLARY_THYROID_CARCINOM
A_DN

FONTAINE_PAPILLARY_THYROID_CARCINOM
A_UP

FONTAINE_THYROID_TUMOR_UNCERTAIN_MA
LIGNANCY_DN

FONTAINE_THYROID_TUMOR_UNCERTAIN_MA
LIGNANCY_UP

FORTSCHEGGER_PHF8_TARGETS_DN
FORTSCHEGGER_PHF8_TARGETS_UP
FOSTER_KDM1A_TARGETS_DN
FOSTER_KDM1A_TARGETS_UP
FOSTER_TOLERANT_MACROPHAGE_DN
FOSTER_TOLERANT_MACROPHAGE_UP
FOURNIER_ACINAR_DEVELOPMENT_EARLY_D
N

FOURNIER_ACINAR_DEVELOPMENT_EARLY_U
P

FOURNIER_ACINAR_DEVELOPMENT_LATE_2
FOURNIER_ACINAR_DEVELOPMENT_LATE_DN
FOURNIER_ACINAR_DEVELOPMENT_LATE_UP
FOX_Q2
FOXD3_01
FOXJ2_01
FOXJ2_02
FOXM1_01
FOXO1_01
FOXO1_02
FOXO3_01
FOXO4_01
FOXO4_02
FRASOR_RESPONSE_TO_ESTRADIOL_DN
FRASOR_RESPONSE_TO_ESTRADIOL_UP
FRASOR_RESPONSE_TO_SERM_OR_FULVESTR
ANT_DN

FRASOR_RESPONSE_TO_SERM_OR_FULVESTR
ANT_UP

FRASOR_TAMOXIFEN_RESPONSE_DN
FRASOR_TAMOXIFEN_RESPONSE_UP
FREAC2_01
FREAC3_01
FREAC4_01
FREAC7_01
FREDERICK_PRKCI_TARGETS
FRIDMAN_IMMORTALIZATION_DN
FRIDMAN_SENESCENCE_DN
FRIDMAN_SENESCENCE_UP
FU_INTERACT_WITH_ALKBH8
FUJII_YBX1_TARGETS_DN
FUJII_YBX1_TARGETS_UP
FUJIWARA_PARK2_HEPATOCYTE_PROLIFERA
TION_DN

FUJIWARA_PARK2_HEPATOCYTE_PROLIFERA
TION_UP

FUJIWARA_PARK2_IN_LIVER_CANCER_DN
FUJIWARA_PARK2_IN_LIVER_CANCER_UP
FUKUSHIMA_TNFSF11_TARGETS
FULCHER_INFLAMMATORY_RESPONSE_LECTI
N_VS_LPS_DN

FULCHER_INFLAMMATORY_RESPONSE_LECTI
N_VS_LPS_UP

FUNG_IL2_SIGNALING_1
FUNG_IL2_SIGNALING_2
FUNG_IL2_TARGETS_WITH_STAT5_BINDING
_SITES

FUNG_IL2_TARGETS_WITH_STAT5_BINDING
_SITES_T1

FURUKAWA_DUSP6_TARGETS_PCI35_DN
FURUKAWA_DUSP6_TARGETS_PCI35_UP
FXR_IR1_Q6
FXR_Q3