Browse Gene Sets

Gene set name:

 

By first letter:

 

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By collection:

[about the MSigDB collections]

  • H (hallmark gene sets, 50 gene sets)
  • C1 (positional gene sets, 326 gene sets)
  • C2 (curated gene sets, 4762 gene sets)
    • CGP (chemical and genetic perturbations, 3433 gene sets)
    • CP (Canonical pathways, 1329 gene sets)
    • CP:BIOCARTA (BioCarta gene sets, 217 gene sets)
    • CP:KEGG (KEGG gene sets, 186 gene sets)
    • CP:REACTOME (Reactome gene sets, 674 gene sets)
  • C3 (motif gene sets, 836 gene sets)
    • MIR (microRNA targets, 221 gene sets)
    • TFT (transcription factor targets, 615 gene sets)
  • C4 (computational gene sets, 858 gene sets)
    • CGN (cancer gene neighborhoods, 427 gene sets)
    • CM (cancer modules, 431 gene sets)
  • C5 (GO gene sets, 5917 gene sets)
    • BP (GO biological process, 4436 gene sets)
    • CC (GO cellular component, 580 gene sets)
    • MF (GO molecular function, 901 gene sets)
  • C6 (oncogenic signatures, 189 gene sets)
  • C7 (immunologic signatures, 4872 gene sets)

Gene sets starting with I

Click on a gene set name to view its gene set page.

ICHIBA_GRAFT_VERSUS_HOST_DISEASE_35
D_DN

ICHIBA_GRAFT_VERSUS_HOST_DISEASE_35
D_UP

ICHIBA_GRAFT_VERSUS_HOST_DISEASE_D7
_DN

ICHIBA_GRAFT_VERSUS_HOST_DISEASE_D7
_UP

ICSBP_Q6
IGARASHI_ATF4_TARGETS_DN
IGARASHI_ATF4_TARGETS_UP
IGLESIAS_E2F_TARGETS_DN
IGLESIAS_E2F_TARGETS_UP
IIZUKA_LIVER_CANCER_EARLY_RECURRENC
E

IIZUKA_LIVER_CANCER_PROGRESSION_G1_
G2_DN

IIZUKA_LIVER_CANCER_PROGRESSION_G1_
G2_UP

IIZUKA_LIVER_CANCER_PROGRESSION_G2_
G3_DN

IIZUKA_LIVER_CANCER_PROGRESSION_G2_
G3_UP

IIZUKA_LIVER_CANCER_PROGRESSION_L0_
L1_DN

IIZUKA_LIVER_CANCER_PROGRESSION_L0_
L1_UP

IIZUKA_LIVER_CANCER_PROGRESSION_L1_
G1_DN

IIZUKA_LIVER_CANCER_PROGRESSION_L1_
G1_UP

IK1_01
IK2_01
IK3_01
IKEDA_MIR133_TARGETS_DN
IKEDA_MIR133_TARGETS_UP
IKEDA_MIR1_TARGETS_DN
IKEDA_MIR1_TARGETS_UP
IKEDA_MIR30_TARGETS_DN
IKEDA_MIR30_TARGETS_UP
IL15_UP.V1_DN
IL15_UP.V1_UP
IL21_UP.V1_DN
IL21_UP.V1_UP
IL2_UP.V1_DN
IL2_UP.V1_UP
IM_SREBF1A_TARGETS
IMMUNE_EFFECTOR_PROCESS
IMMUNE_RESPONSE
IMMUNE_SYSTEM_DEVELOPMENT
IMMUNE_SYSTEM_PROCESS
INAMURA_LUNG_CANCER_SCC_DN
INAMURA_LUNG_CANCER_SCC_SUBTYPES_DN
INAMURA_LUNG_CANCER_SCC_SUBTYPES_UP
INAMURA_LUNG_CANCER_SCC_UP
INDUCTION_OF_APOPTOSIS_BY_EXTRACELL
ULAR_SIGNALS

INDUCTION_OF_APOPTOSIS_BY_INTRACELL
ULAR_SIGNALS

INFLAMMATORY_RESPONSE
INGA_TP53_TARGETS
INGRAM_SHH_TARGETS
INGRAM_SHH_TARGETS_DN
INGRAM_SHH_TARGETS_UP
INNATE_IMMUNE_RESPONSE
INORGANIC_CATION_TRANSMEMBRANE_TRAN
SPORTER_ACTIVITY

INOSITOL_OR_PHOSPHATIDYLINOSITOL_KI
NASE_ACTIVITY

INOSITOL_OR_PHOSPHATIDYLINOSITOL_PH
OSPHATASE_ACTIVITY

INSULIN_LIKE_GROWTH_FACTOR_RECEPTOR
_BINDING

INSULIN_RECEPTOR_SIGNALING_PATHWAY
INTEGRAL_TO_GOLGI_MEMBRANE
INTEGRAL_TO_MEMBRANE
INTEGRAL_TO_PLASMA_MEMBRANE
INTEGRIN_BINDING
INTERCELLULAR_JUNCTION
INTERFERON_GAMMA_BIOSYNTHETIC_PROCE
SS

INTERFERON_GAMMA_PRODUCTION
INTERLEUKIN_1_SECRETION
INTERLEUKIN_2_PRODUCTION
INTERLEUKIN_8_BIOSYNTHETIC_PROCESS
INTERLEUKIN_8_PRODUCTION
INTERLEUKIN_BINDING
INTERLEUKIN_RECEPTOR_ACTIVITY
INTERPHASE
INTERPHASE_OF_MITOTIC_CELL_CYCLE
INTRA_GOLGI_VESICLE_MEDIATED_TRANSP
ORT

INTRACELLULAR_NON_MEMBRANE_BOUND_OR
GANELLE

INTRINSIC_TO_GOLGI_MEMBRANE
INTRINSIC_TO_MEMBRANE
INTRINSIC_TO_PLASMA_MEMBRANE
ION_BINDING
ION_HOMEOSTASIS
IONOTROPIC_GLUTAMATE_RECEPTOR_ACTIV
ITY

IPF1_Q4
IRF1_01
IRF1_Q6
IRF2_01
IRF7_01
IRF_Q6
IRITANI_MAD1_TARGETS_DN
IRITANI_MAD1_TARGETS_UP
ISHIDA_E2F_TARGETS
ISHIDA_TARGETS_OF_SYT_SSX_FUSIONS
ISHIKAWA_STING_SIGNALING
ISRE_01
ISSAEVA_MLL2_TARGETS
ITO_PTTG1_TARGETS_DN
ITO_PTTG1_TARGETS_UP
IVANOV_MUTATED_IN_COLON_CANCER
IVANOVA_HEMATOPOIESIS_EARLY_PROGENI
TOR

IVANOVA_HEMATOPOIESIS_INTERMEDIATE_
PROGENITOR

IVANOVA_HEMATOPOIESIS_LATE_PROGENIT
OR

IVANOVA_HEMATOPOIESIS_MATURE_CELL
IVANOVA_HEMATOPOIESIS_STEM_CELL
IVANOVA_HEMATOPOIESIS_STEM_CELL_AND
_PROGENITOR

IVANOVA_HEMATOPOIESIS_STEM_CELL_LON
G_TERM

IVANOVA_HEMATOPOIESIS_STEM_CELL_SHO
RT_TERM

IVANOVSKA_MIR106B_TARGETS
IWANAGA_CARCINOGENESIS_BY_KRAS_DN
IWANAGA_CARCINOGENESIS_BY_KRAS_PTEN
_DN

IWANAGA_CARCINOGENESIS_BY_KRAS_PTEN
_UP

IWANAGA_CARCINOGENESIS_BY_KRAS_UP
IWANAGA_E2F1_TARGETS_INDUCED_BY_SER
UM

IWANAGA_E2F1_TARGETS_NOT_INDUCED_BY
_SERUM

IYENGAR_RESPONSE_TO_ADIPOCYTE_FACTO
RS

IZADPANAH_STEM_CELL_ADIPOSE_VS_BONE
_DN

IZADPANAH_STEM_CELL_ADIPOSE_VS_BONE
_UP