Browse Gene Sets

Gene set name:

 

By first letter:

 

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By collection:

[about the MSigDB collections]

  • H (hallmark gene sets, 50 gene sets)
  • C1 (positional gene sets, 326 gene sets)
  • C2 (curated gene sets, 4762 gene sets)
    • CGP (chemical and genetic perturbations, 3433 gene sets)
    • CP (Canonical pathways, 1329 gene sets)
    • CP:BIOCARTA (BioCarta gene sets, 217 gene sets)
    • CP:KEGG (KEGG gene sets, 186 gene sets)
    • CP:REACTOME (Reactome gene sets, 674 gene sets)
  • C3 (motif gene sets, 836 gene sets)
    • MIR (microRNA targets, 221 gene sets)
    • TFT (transcription factor targets, 615 gene sets)
  • C4 (computational gene sets, 858 gene sets)
    • CGN (cancer gene neighborhoods, 427 gene sets)
    • CM (cancer modules, 431 gene sets)
  • C5 (GO gene sets, 5917 gene sets)
    • BP (GO biological process, 4436 gene sets)
    • CC (GO cellular component, 580 gene sets)
    • MF (GO molecular function, 901 gene sets)
  • C6 (oncogenic signatures, 189 gene sets)
  • C7 (immunologic signatures, 4872 gene sets)

Gene sets starting with J

Click on a gene set name to view its gene set page.

JAATINEN_HEMATOPOIETIC_STEM_CELL_DN
JAATINEN_HEMATOPOIETIC_STEM_CELL_UP
JACKSON_DNMT1_TARGETS_DN
JACKSON_DNMT1_TARGETS_UP
JAEGER_METASTASIS_DN
JAEGER_METASTASIS_UP
JAERVINEN_AMPLIFIED_IN_LARYNGEAL_CA
NCER

JAIN_NFKB_SIGNALING
JAK2_DN.V1_DN
JAK2_DN.V1_UP
JAK_STAT_CASCADE
JAZAERI_BREAST_CANCER_BRCA1_VS_BRCA
2_DN

JAZAERI_BREAST_CANCER_BRCA1_VS_BRCA
2_UP

JAZAG_TGFB1_SIGNALING_DN
JAZAG_TGFB1_SIGNALING_UP
JAZAG_TGFB1_SIGNALING_VIA_SMAD4_DN
JAZAG_TGFB1_SIGNALING_VIA_SMAD4_UP
JECHLINGER_EPITHELIAL_TO_MESENCHYMA
L_TRANSITION_DN

JECHLINGER_EPITHELIAL_TO_MESENCHYMA
L_TRANSITION_UP

JEON_SMAD6_TARGETS_DN
JEON_SMAD6_TARGETS_UP
JEPSEN_SMRT_TARGETS
JI_CARCINOGENESIS_BY_KRAS_AND_STK11
_DN

JI_CARCINOGENESIS_BY_KRAS_AND_STK11
_UP

JI_METASTASIS_REPRESSED_BY_STK11
JI_RESPONSE_TO_FSH_DN
JI_RESPONSE_TO_FSH_UP
JIANG_AGING_CEREBRAL_CORTEX_DN
JIANG_AGING_CEREBRAL_CORTEX_UP
JIANG_AGING_HYPOTHALAMUS_DN
JIANG_AGING_HYPOTHALAMUS_UP
JIANG_CORE_DUPLICON_GENES
JIANG_HYPOXIA_CANCER
JIANG_HYPOXIA_NORMAL
JIANG_HYPOXIA_VIA_VHL
JIANG_TIP30_TARGETS_DN
JIANG_TIP30_TARGETS_UP
JIANG_VHL_TARGETS
JISON_SICKLE_CELL_DISEASE_DN
JISON_SICKLE_CELL_DISEASE_UP
JNK_DN.V1_DN
JNK_DN.V1_UP
JOHANSSON_BRAIN_CANCER_EARLY_VS_LAT
E_DN

JOHANSSON_BRAIN_CANCER_EARLY_VS_LAT
E_UP

JOHANSSON_GLIOMAGENESIS_BY_PDGFB_DN
JOHANSSON_GLIOMAGENESIS_BY_PDGFB_UP
JOHNSTONE_PARVB_TARGETS_1_DN
JOHNSTONE_PARVB_TARGETS_1_UP
JOHNSTONE_PARVB_TARGETS_2_DN
JOHNSTONE_PARVB_TARGETS_2_UP
JOHNSTONE_PARVB_TARGETS_3_DN
JOHNSTONE_PARVB_TARGETS_3_UP
JONES_TCOF1_TARGETS
JOSEPH_RESPONSE_TO_SODIUM_BUTYRATE_
DN

JOSEPH_RESPONSE_TO_SODIUM_BUTYRATE_
UP

JU_AGING_TERC_TARGETS_DN
JU_AGING_TERC_TARGETS_UP
JUBAN_TARGETS_OF_SPI1_AND_FLI1_DN
JUBAN_TARGETS_OF_SPI1_AND_FLI1_UP