Browse Gene Sets

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By collection:

[about the MSigDB collections]

  • H (hallmark gene sets, 50 gene sets)
  • C1 (positional gene sets, 326 gene sets)
  • C2 (curated gene sets, 4762 gene sets)
    • CGP (chemical and genetic perturbations, 3433 gene sets)
    • CP (Canonical pathways, 1329 gene sets)
    • CP:BIOCARTA (BioCarta gene sets, 217 gene sets)
    • CP:KEGG (KEGG gene sets, 186 gene sets)
    • CP:REACTOME (Reactome gene sets, 674 gene sets)
  • C3 (motif gene sets, 836 gene sets)
    • MIR (microRNA targets, 221 gene sets)
    • TFT (transcription factor targets, 615 gene sets)
  • C4 (computational gene sets, 858 gene sets)
    • CGN (cancer gene neighborhoods, 427 gene sets)
    • CM (cancer modules, 431 gene sets)
  • C5 (GO gene sets, 5917 gene sets)
    • BP (GO biological process, 4436 gene sets)
    • CC (GO cellular component, 580 gene sets)
    • MF (GO molecular function, 901 gene sets)
  • C6 (oncogenic signatures, 189 gene sets)
  • C7 (immunologic signatures, 4872 gene sets)

Gene sets starting with L

Click on a gene set name to view its gene set page.

LA_MEN1_TARGETS
LABBE_TARGETS_OF_TGFB1_AND_WNT3A_DN
LABBE_TARGETS_OF_TGFB1_AND_WNT3A_UP
LABBE_TGFB1_TARGETS_DN
LABBE_TGFB1_TARGETS_UP
LABBE_WNT3A_TARGETS_DN
LABBE_WNT3A_TARGETS_UP
LAIHO_COLORECTAL_CANCER_SERRATED_DN
LAIHO_COLORECTAL_CANCER_SERRATED_UP
LAMB_CCND1_TARGETS
LAMELLIPODIUM
LANDEMAINE_LUNG_METASTASIS
LANDIS_BREAST_CANCER_PROGRESSION_DN
LANDIS_BREAST_CANCER_PROGRESSION_UP
LANDIS_ERBB2_BREAST_PRENEOPLASTIC_D
N

LANDIS_ERBB2_BREAST_PRENEOPLASTIC_U
P

LANDIS_ERBB2_BREAST_TUMORS_324_DN
LANDIS_ERBB2_BREAST_TUMORS_324_UP
LANDIS_ERBB2_BREAST_TUMORS_65_DN
LANDIS_ERBB2_BREAST_TUMORS_65_UP
LANG_MYB_FAMILY_TARGETS
LASTOWSKA_COAMPLIFIED_WITH_MYCN
LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER
_DN

LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER
_UP

LATE_ENDOSOME
LAU_APOPTOSIS_CDKN2A_DN
LAU_APOPTOSIS_CDKN2A_UP
LBP1_Q6
LE_EGR2_TARGETS_DN
LE_EGR2_TARGETS_UP
LE_NEURONAL_DIFFERENTIATION_DN
LE_NEURONAL_DIFFERENTIATION_UP
LE_SKI_TARGETS_DN
LE_SKI_TARGETS_UP
LEADING_EDGE
LEE_AGING_CEREBELLUM_DN
LEE_AGING_CEREBELLUM_UP
LEE_AGING_MUSCLE_DN
LEE_AGING_MUSCLE_UP
LEE_AGING_NEOCORTEX_DN
LEE_AGING_NEOCORTEX_UP
LEE_BMP2_TARGETS_DN
LEE_BMP2_TARGETS_UP
LEE_CALORIE_RESTRICTION_MUSCLE_DN
LEE_CALORIE_RESTRICTION_MUSCLE_UP
LEE_CALORIE_RESTRICTION_NEOCORTEX_D
N

LEE_CALORIE_RESTRICTION_NEOCORTEX_U
P

LEE_DIFFERENTIATING_T_LYMPHOCYTE
LEE_DOUBLE_POLAR_THYMOCYTE
LEE_EARLY_T_LYMPHOCYTE_DN
LEE_EARLY_T_LYMPHOCYTE_UP
LEE_INTRATHYMIC_T_PROGENITOR
LEE_LIVER_CANCER
LEE_LIVER_CANCER_ACOX1_DN
LEE_LIVER_CANCER_ACOX1_UP
LEE_LIVER_CANCER_CIPROFIBRATE_DN
LEE_LIVER_CANCER_CIPROFIBRATE_UP
LEE_LIVER_CANCER_DENA_DN
LEE_LIVER_CANCER_DENA_UP
LEE_LIVER_CANCER_E2F1_DN
LEE_LIVER_CANCER_E2F1_UP
LEE_LIVER_CANCER_HEPATOBLAST
LEE_LIVER_CANCER_MYC_DN
LEE_LIVER_CANCER_MYC_E2F1_DN
LEE_LIVER_CANCER_MYC_E2F1_UP
LEE_LIVER_CANCER_MYC_TGFA_DN
LEE_LIVER_CANCER_MYC_TGFA_UP
LEE_LIVER_CANCER_MYC_UP
LEE_LIVER_CANCER_SURVIVAL_DN
LEE_LIVER_CANCER_SURVIVAL_UP
LEE_METASTASIS_AND_ALTERNATIVE_SPLI
CING_DN

LEE_METASTASIS_AND_ALTERNATIVE_SPLI
CING_UP

LEE_METASTASIS_AND_RNA_PROCESSING_U
P

LEE_NAIVE_T_LYMPHOCYTE
LEE_NEURAL_CREST_STEM_CELL_DN
LEE_NEURAL_CREST_STEM_CELL_UP
LEE_RECENT_THYMIC_EMIGRANT
LEE_SP4_THYMOCYTE
LEE_TARGETS_OF_PTCH1_AND_SUFU_DN
LEE_TARGETS_OF_PTCH1_AND_SUFU_UP
LEF1_Q2
LEF1_Q6
LEF1_UP.V1_DN
LEF1_UP.V1_UP
LEI_HOXC8_TARGETS_DN
LEI_HOXC8_TARGETS_UP
LEI_MYB_TARGETS
LEIN_ASTROCYTE_MARKERS
LEIN_CEREBELLUM_MARKERS
LEIN_CHOROID_PLEXUS_MARKERS
LEIN_LOCALIZED_TO_DISTAL_AND_PROXIM
AL_DENDRITES

LEIN_LOCALIZED_TO_PROXIMAL_DENDRITE
S

LEIN_MEDULLA_MARKERS
LEIN_MIDBRAIN_MARKERS
LEIN_NEURON_MARKERS
LEIN_OLIGODENDROCYTE_MARKERS
LEIN_PONS_MARKERS
LENAOUR_DENDRITIC_CELL_MATURATION_D
N

LENAOUR_DENDRITIC_CELL_MATURATION_U
P

LEONARD_HYPOXIA
LEUKOCYTE_ACTIVATION
LEUKOCYTE_DIFFERENTIATION
LFA1_Q6
LHX3_01
LI_ADIPOGENESIS_BY_ACTIVATED_PPARG
LI_AMPLIFIED_IN_LUNG_CANCER
LI_CISPLATIN_RESISTANCE_DN
LI_CISPLATIN_RESISTANCE_UP
LI_CYTIDINE_ANALOG_PATHWAY
LI_CYTIDINE_ANALOGS_CYCTOTOXICITY
LI_DCP2_BOUND_MRNA
LI_INDUCED_T_TO_NATURAL_KILLER_DN
LI_INDUCED_T_TO_NATURAL_KILLER_UP
LI_LUNG_CANCER
LI_PROSTATE_CANCER_EPIGENETIC
LI_WILMS_TUMOR
LI_WILMS_TUMOR_ANAPLASTIC_DN
LI_WILMS_TUMOR_ANAPLASTIC_UP
LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN
LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_UP
LI_WILMS_TUMOR_VS_FETAL_KIDNEY_2_DN
LI_WILMS_TUMOR_VS_FETAL_KIDNEY_2_UP
LIAN_LIPA_TARGETS_3M
LIAN_LIPA_TARGETS_6M
LIAN_NEUTROPHIL_GRANULE_CONSTITUENT
S

LIANG_HEMATOPOIESIS_STEM_CELL_NUMBE
R_LARGE_VS_TINY_DN

LIANG_HEMATOPOIESIS_STEM_CELL_NUMBE
R_LARGE_VS_TINY_UP

LIANG_HEMATOPOIESIS_STEM_CELL_NUMBE
R_QTL

LIANG_HEMATOPOIESIS_STEM_CELL_NUMBE
R_SMALL_VS_HUGE_DN

LIANG_HEMATOPOIESIS_STEM_CELL_NUMBE
R_SMALL_VS_HUGE_UP

LIANG_SILENCED_BY_METHYLATION_2
LIANG_SILENCED_BY_METHYLATION_DN
LIANG_SILENCED_BY_METHYLATION_UP
LIAO_HAVE_SOX4_BINDING_SITES
LIAO_METASTASIS
LIEN_BREAST_CARCINOMA_METAPLASTIC
LIEN_BREAST_CARCINOMA_METAPLASTIC_V
S_DUCTAL_DN

LIEN_BREAST_CARCINOMA_METAPLASTIC_V
S_DUCTAL_UP

LIGASE_ACTIVITY
LIGASE_ACTIVITY_FORMING_CARBON_NITR
OGEN_BONDS

LIM_MAMMARY_LUMINAL_MATURE_DN
LIM_MAMMARY_LUMINAL_MATURE_UP
LIM_MAMMARY_LUMINAL_PROGENITOR_DN
LIM_MAMMARY_LUMINAL_PROGENITOR_UP
LIM_MAMMARY_STEM_CELL_DN
LIM_MAMMARY_STEM_CELL_UP
LIN_APC_TARGETS
LIN_MELANOMA_COPY_NUMBER_DN
LIN_MELANOMA_COPY_NUMBER_UP
LIN_NPAS4_TARGETS_DN
LIN_NPAS4_TARGETS_UP
LIN_SILENCED_BY_TUMOR_MICROENVIRONM
ENT

LIN_TUMOR_ESCAPE_FROM_IMMUNE_ATTACK
LINDGREN_BLADDER_CANCER_CLUSTER_1_D
N

LINDGREN_BLADDER_CANCER_CLUSTER_1_U
P

LINDGREN_BLADDER_CANCER_CLUSTER_2A_
DN

LINDGREN_BLADDER_CANCER_CLUSTER_2A_
UP

LINDGREN_BLADDER_CANCER_CLUSTER_2B
LINDGREN_BLADDER_CANCER_CLUSTER_3_D
N

LINDGREN_BLADDER_CANCER_CLUSTER_3_U
P

LINDGREN_BLADDER_CANCER_HIGH_RECURR
ENCE

LINDGREN_BLADDER_CANCER_WITH_LOH_IN
_CHR9Q

LINDSTEDT_DENDRITIC_CELL_MATURATION
_A

LINDSTEDT_DENDRITIC_CELL_MATURATION
_B

LINDSTEDT_DENDRITIC_CELL_MATURATION
_C

LINDSTEDT_DENDRITIC_CELL_MATURATION
_D

LINDVALL_IMMORTALIZED_BY_TERT_DN
LINDVALL_IMMORTALIZED_BY_TERT_UP
LINSLEY_MIR16_TARGETS
LIPID_CATABOLIC_PROCESS
LIPID_KINASE_ACTIVITY
LIPID_RAFT
LIU_BREAST_CANCER
LIU_CDX2_TARGETS_DN
LIU_CDX2_TARGETS_UP
LIU_CMYB_TARGETS_DN
LIU_CMYB_TARGETS_UP
LIU_COMMON_CANCER_GENES
LIU_IL13_MEMORY_MODEL_DN
LIU_IL13_MEMORY_MODEL_UP
LIU_IL13_PRIMING_MODEL
LIU_LIVER_CANCER
LIU_NASOPHARYNGEAL_CARCINOMA
LIU_PROSTATE_CANCER_DN
LIU_PROSTATE_CANCER_UP
LIU_SMARCA4_TARGETS
LIU_SOX4_TARGETS_DN
LIU_SOX4_TARGETS_UP
LIU_TARGETS_OF_VMYB_VS_CMYB_DN
LIU_TARGETS_OF_VMYB_VS_CMYB_UP
LIU_TOPBP1_TARGETS
LIU_VAV3_PROSTATE_CARCINOGENESIS_DN
LIU_VAV3_PROSTATE_CARCINOGENESIS_UP
LIU_VMYB_TARGETS_UP
LMO2COM_01
LMO2COM_02
LOCKWOOD_AMPLIFIED_IN_LUNG_CANCER
LOCOMOTORY_BEHAVIOR
LOPES_METHYLATED_IN_COLON_CANCER_DN
LOPES_METHYLATED_IN_COLON_CANCER_UP
LOPEZ_EPITHELIOID_MESOTHELIOMA
LOPEZ_MBD_TARGETS
LOPEZ_MBD_TARGETS_IMPRINTED_AND_X_L
INKED

LOPEZ_MESOTELIOMA_SURVIVAL_TIME_DN
LOPEZ_MESOTELIOMA_SURVIVAL_TIME_UP
LOPEZ_MESOTHELIOMA_SURVIVAL_DN
LOPEZ_MESOTHELIOMA_SURVIVAL_OVERALL
_DN

LOPEZ_MESOTHELIOMA_SURVIVAL_OVERALL
_UP

LOPEZ_MESOTHELIOMA_SURVIVAL_UP
LOPEZ_MESOTHELIOMA_SURVIVAL_WORST_V
S_BEST_DN

LOPEZ_MESOTHELIOMA_SURVIVAL_WORST_V
S_BEST_UP

LOPEZ_TRANSLATION_VIA_FN1_SIGNALING
LTE2_UP.V1_DN
LTE2_UP.V1_UP
LU_AGING_BRAIN_DN
LU_AGING_BRAIN_UP
LU_EZH2_TARGETS_DN
LU_EZH2_TARGETS_UP
LU_IL4_SIGNALING
LU_TUMOR_ANGIOGENESIS_UP
LU_TUMOR_ENDOTHELIAL_MARKERS_DN
LU_TUMOR_ENDOTHELIAL_MARKERS_UP
LU_TUMOR_VASCULATURE_DN
LU_TUMOR_VASCULATURE_UP
LUCAS_HNF4A_TARGETS_DN
LUCAS_HNF4A_TARGETS_UP
LUDWICZEK_TREATING_IRON_OVERLOAD
LUI_TARGETS_OF_PAX8_PPARG_FUSION
LUI_THYROID_CANCER_CLUSTER_1
LUI_THYROID_CANCER_CLUSTER_2
LUI_THYROID_CANCER_CLUSTER_3
LUI_THYROID_CANCER_CLUSTER_4
LUI_THYROID_CANCER_CLUSTER_5
LUI_THYROID_CANCER_PAX8_PPARG_DN
LUI_THYROID_CANCER_PAX8_PPARG_UP
LUND_SILENCED_BY_METHYLATION
LXR_DR4_Q3
LXR_Q3
LY_AGING_MIDDLE_DN
LY_AGING_MIDDLE_UP
LY_AGING_OLD_DN
LY_AGING_OLD_UP
LY_AGING_PREMATURE_DN
LYASE_ACTIVITY
LYF1_01
LYMPHOCYTE_ACTIVATION
LYMPHOCYTE_DIFFERENTIATION
LYSOSOMAL_MEMBRANE
LYSOSOME
LYSOSOME_ORGANIZATION_AND_BIOGENESI
S

LYTIC_VACUOLE