DatasetLeukemia_collapsed.gct
PhenotypeAML
GeneSetC1.symbols.gmt#chr11q12
Enrichment Score (ES)-0.25016323
Normalized Enrichment Score (NES)-0.99226224
Nominal p-value0.46043167
FDR q-value1.0
FWER p-Value0.998
Table: GSEA Results Summary

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERESCORE_ENRICHMENT
1UBE2L6UBE2L6
StanfordSource,  GeneCards
ubiquitin-conjugating enzyme E2L 61981.0470.0387No
2MS4A1MS4A1
StanfordSource,  GeneCards
membrane-spanning 4-domains, subfamily A, member 110720.659-0.0117No
3FEN1FEN1
StanfordSource,  GeneCards
flap structure-specific endonuclease 113260.606-0.0031No
4C11orf11C11orf11
StanfordSource,  GeneCards
chromosome 11 open reading frame 1115710.5530.0034No
5GIFGIF
StanfordSource,  GeneCards
gastric intrinsic factor (vitamin B synthesis)15820.5500.0332No
6STX3ASTX3A
StanfordSource,  GeneCards
syntaxin 3A17500.5170.0454No
7ROM1ROM1
StanfordSource,  GeneCards
retinal outer segment membrane protein 120360.4680.0431No
8STX5ASTX5A
StanfordSource,  GeneCards
syntaxin 5A21030.4560.0619No
9SCGB1D1SCGB1D1
StanfordSource,  GeneCards
secretoglobin, family 1D, member 122870.4250.0674No
10SCGB1D2SCGB1D2
StanfordSource,  GeneCards
secretoglobin, family 1D, member 226630.3680.0505No
11DDB1DDB1
StanfordSource,  GeneCards
damage-specific DNA binding protein 1, 127kDa29250.3260.0426No
12RARRES3RARRES3
StanfordSource,  GeneCards
retinoic acid receptor responder (tazarotene induced) 329840.3190.0547No
13NXF1NXF1
StanfordSource,  GeneCards
nuclear RNA export factor 131420.2980.0556No
14SSRP1SSRP1
StanfordSource,  GeneCards
structure specific recognition protein 132860.2760.0568No
15C11orf9C11orf9
StanfordSource,  GeneCards
chromosome 11 open reading frame 933490.2660.0654No
16B3GAT3B3GAT3
StanfordSource,  GeneCards
beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)33920.2590.0757No
17SCGB2A2SCGB2A2
StanfordSource,  GeneCards
secretoglobin, family 2A, member 235280.2390.0756No
18MS4A2MS4A2
StanfordSource,  GeneCards
membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)37360.2110.0667No
19GPR44GPR44
StanfordSource,  GeneCards
G protein-coupled receptor 4442390.1500.0249No
20CD5CD5
StanfordSource,  GeneCards
CD5 antigen (p56-62)43250.1390.0242No
21SCGB1A1SCGB1A1
StanfordSource,  GeneCards
secretoglobin, family 1A, member 1 (uteroglobin)48170.078-0.0205No
22TCN1TCN1
StanfordSource,  GeneCards
transcobalamin I (vitamin B12 binding protein, R binder family)50480.051-0.0407No
23FABP5FABP5
StanfordSource,  GeneCards
fatty acid binding protein 5 (psoriasis-associated)50710.048-0.0402No
24BSCL2BSCL2
StanfordSource,  GeneCards
Bernardinelli-Seip congenital lipodystrophy 2 (seipin)52450.027-0.0560No
25LPXNLPXN
StanfordSource,  GeneCards
leupaxin6246-0.092-0.1508No
26FADS1FADS1
StanfordSource,  GeneCards
fatty acid desaturase 16429-0.112-0.1627No
27VMD2VMD2
StanfordSource,  GeneCards
vitelliform macular dystrophy (Best disease, bestrophin)6472-0.117-0.1604No
28EEF1GEEF1G
StanfordSource,  GeneCards
eukaryotic translation elongation factor 1 gamma6625-0.136-0.1680No
29SCGB2A1SCGB2A1
StanfordSource,  GeneCards
secretoglobin, family 2A, member 16760-0.151-0.1729No
30SERPING1SERPING1
StanfordSource,  GeneCards
serine (or cysteine) proteinase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)6942-0.172-0.1814No
31DTX4DTX4
StanfordSource,  GeneCards
deltex 4 homolog (Drosophila)7080-0.188-0.1845No
32CNTFCNTF
StanfordSource,  GeneCards
ciliary neurotrophic factor7168-0.196-0.1822No
33P2RX3P2RX3
StanfordSource,  GeneCards
purinergic receptor P2X, ligand-gated ion channel, 37438-0.225-0.1966No
34CTNND1CTNND1
StanfordSource,  GeneCards
catenin (cadherin-associated protein), delta 17639-0.249-0.2027No
35PRG2PRG2
StanfordSource,  GeneCards
proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)7836-0.277-0.2068No
36MS4A3MS4A3
StanfordSource,  GeneCards
membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)8271-0.341-0.2311Yes
37HRASLS3HRASLS3
StanfordSource,  GeneCards
HRAS-like suppressor 38277-0.342-0.2125Yes
38SLC3A2SLC3A2
StanfordSource,  GeneCards
solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 28461-0.377-0.2097Yes
39FADS2FADS2
StanfordSource,  GeneCards
fatty acid desaturase 28464-0.378-0.1888Yes
40GLYATGLYAT
StanfordSource,  GeneCards
glycine-N-acyltransferase8703-0.428-0.1886Yes
41FTH1FTH1
StanfordSource,  GeneCards
ferritin, heavy polypeptide 18807-0.449-0.1738Yes
42OSBPOSBP
StanfordSource,  GeneCards
oxysterol binding protein8864-0.460-0.1537Yes
43SLC22A6SLC22A6
StanfordSource,  GeneCards
solute carrier family 22 (organic anion transporter), member 69027-0.494-0.1423Yes
44PGA5PGA5
StanfordSource,  GeneCards
pepsinogen 5, group I (pepsinogen A)9197-0.532-0.1295Yes
45TAF6LTAF6L
StanfordSource,  GeneCards
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa9327-0.565-0.1107Yes
46AGTRL1AGTRL1
StanfordSource,  GeneCards
angiotensin II receptor-like 19358-0.577-0.0815Yes
47SLC43A1SLC43A1
StanfordSource,  GeneCards
solute carrier family 43, member 19832-0.794-0.0843Yes
48CD6CD6
StanfordSource,  GeneCards
CD6 antigen9843-0.799-0.0407Yes
49PRP19PRP19
StanfordSource,  GeneCards
PRP19/PSO4 homolog (S. cerevisiae)10035-1.1050.0020Yes
Table: GSEA details [plain text format]



Fig 1: GSEA_Results   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List



Fig 2: Leukemia_collapsed.gct   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: Null Distribution for chr11q12   
Histogram of random enrichment scores (real ES = -0.25016323 )