Details for gene set chr13[GSEA]

Table: GSEA Results Summary

Dataset	Leukemia_collapsed.gct
Phenotype	ALL
GeneSet	C1.symbols.gmt#chr13
Enrichment Score (ES)	0.34253657
Normalized Enrichment Score (NES)	1.4610614
Nominal p-value	0.031496063
FDR q-value	0.524916
FWER p-Value	0.843

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RES	CORE_ENRICHMENT
1	FOXO1A	FOXO1A StanfordSource, GeneCards	forkhead box O1A (rhabdomyosarcoma)	9	1.701	0.0350	Yes
2	LIG4	LIG4 StanfordSource, GeneCards	ligase IV, DNA, ATP-dependent	27	1.457	0.0640	Yes
3	STK24	STK24 StanfordSource, GeneCards	serine/threonine kinase 24 (STE20 homolog, yeast)	65	1.255	0.0868	Yes
4	MRPS31	MRPS31 StanfordSource, GeneCards	mitochondrial ribosomal protein S31	125	1.153	0.1052	Yes
5	PCDH9	PCDH9 StanfordSource, GeneCards	protocadherin 9	138	1.133	0.1279	Yes
6	RB1	RB1 StanfordSource, GeneCards	retinoblastoma 1 (including osteosarcoma)	174	1.083	0.1472	Yes
7	ESD	ESD StanfordSource, GeneCards	esterase D/formylglutathione hydrolase	319	0.951	0.1528	Yes
8	CHC1L	CHC1L StanfordSource, GeneCards	chromosome condensation 1-like	327	0.948	0.1721	Yes
9	TUBGCP3	TUBGCP3 StanfordSource, GeneCards	tubulin, gamma complex associated protein 3	425	0.893	0.1812	Yes
10	HMGB1	HMGB1 StanfordSource, GeneCards	high-mobility group box 1	457	0.874	0.1965	Yes
11	RNF6	RNF6 StanfordSource, GeneCards	ring finger protein (C3H2C3 type) 6	481	0.862	0.2124	Yes
12	AKAP11	AKAP11 StanfordSource, GeneCards	A kinase (PRKA) anchor protein 11	550	0.829	0.2230	Yes
13	EFNB2	EFNB2 StanfordSource, GeneCards	ephrin-B2	649	0.796	0.2299	Yes
14	ARHGEF7	ARHGEF7 StanfordSource, GeneCards	Rho guanine nucleotide exchange factor (GEF) 7	692	0.781	0.2422	Yes
15	FLJ11712	FLJ11712 StanfordSource, GeneCards	hypothetical protein FLJ11712	836	0.730	0.2432	Yes
16	APRIN	APRIN StanfordSource, GeneCards	androgen-induced proliferation inhibitor	1029	0.670	0.2380	Yes
17	CDK8	CDK8 StanfordSource, GeneCards	cyclin-dependent kinase 8	1164	0.639	0.2380	Yes
18	DES	DES StanfordSource, GeneCards	desmin	1259	0.620	0.2416	Yes
19	SUCLA2	SUCLA2 StanfordSource, GeneCards	succinate-CoA ligase, ADP-forming, beta subunit	1304	0.611	0.2501	Yes
20	CDC16	CDC16 StanfordSource, GeneCards	CDC16 cell division cycle 16 homolog (S. cerevisiae)	1411	0.587	0.2518	Yes
21	ING1	ING1 StanfordSource, GeneCards	inhibitor of growth family, member 1	1413	0.587	0.2641	Yes
22	GTF3A	GTF3A StanfordSource, GeneCards	general transcription factor IIIA	1441	0.581	0.2736	Yes
23	GTF2F2	GTF2F2 StanfordSource, GeneCards	general transcription factor IIF, polypeptide 2, 30kDa	1491	0.569	0.2807	Yes
24	PCCA	PCCA StanfordSource, GeneCards	propionyl Coenzyme A carboxylase, alpha polypeptide	1497	0.569	0.2922	Yes
25	ZNF198	ZNF198 StanfordSource, GeneCards	zinc finger protein 198	1502	0.568	0.3038	Yes
26	UPF3A	UPF3A StanfordSource, GeneCards	UPF3 regulator of nonsense transcripts homolog A (yeast)	1525	0.564	0.3135	Yes
27	TBC1D4	TBC1D4 StanfordSource, GeneCards	TBC1 domain family, member 4	1814	0.506	0.2951	Yes
28	TUBA2	TUBA2 StanfordSource, GeneCards	tubulin, alpha 2	1853	0.499	0.3018	Yes
29	POU4F1	POU4F1 StanfordSource, GeneCards	POU domain, class 4, transcription factor 1	1917	0.487	0.3058	Yes
30	F10	F10 StanfordSource, GeneCards	coagulation factor X	1959	0.480	0.3118	Yes
31	CLN5	CLN5 StanfordSource, GeneCards	ceroid-lipofuscinosis, neuronal 5	2015	0.472	0.3162	Yes
32	SAP18	SAP18 StanfordSource, GeneCards	sin3-associated polypeptide, 18kDa	2033	0.468	0.3244	Yes
33	MCF2L	MCF2L StanfordSource, GeneCards	MCF.2 cell line derived transforming sequence-like	2113	0.454	0.3260	Yes
34	KIAA0774	KIAA0774 StanfordSource, GeneCards	KIAA0774	2271	0.427	0.3192	Yes
35	MIPEP	MIPEP StanfordSource, GeneCards	mitochondrial intermediate peptidase	2394	0.411	0.3156	Yes
36	UCHL3	UCHL3 StanfordSource, GeneCards	ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)	2405	0.409	0.3232	Yes
37	SACS	SACS StanfordSource, GeneCards	spastic ataxia of Charlevoix-Saguenay (sacsin)	2452	0.402	0.3270	Yes
38	COX7C	COX7C StanfordSource, GeneCards	cytochrome c oxidase subunit VIIc	2531	0.389	0.3274	Yes
39	SPRY2	SPRY2 StanfordSource, GeneCards	sprouty homolog 2 (Drosophila)	2552	0.385	0.3335	Yes
40	GPR12	GPR12 StanfordSource, GeneCards	G protein-coupled receptor 12	2556	0.384	0.3413	Yes
41	FH	FH StanfordSource, GeneCards	fumarate hydratase	2623	0.373	0.3425	Yes
42	DZIP1	DZIP1 StanfordSource, GeneCards	DAZ interacting protein 1	3130	0.300	0.2979	No
43	UBL3	UBL3 StanfordSource, GeneCards	ubiquitin-like 3	3133	0.299	0.3040	No
44	ATP12A	ATP12A StanfordSource, GeneCards	ATPase, H+/K+ transporting, nongastric, alpha polypeptide	3222	0.285	0.3012	No
45	DOCK9	DOCK9 StanfordSource, GeneCards	dedicator of cytokinesis 9	3256	0.281	0.3038	No
46	ERCC5	ERCC5 StanfordSource, GeneCards	excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))	3358	0.264	0.2992	No
47	NUFIP1	NUFIP1 StanfordSource, GeneCards	nuclear fragile X mental retardation protein interacting protein 1	3622	0.227	0.2775	No
48	RAP2A	RAP2A StanfordSource, GeneCards	RAP2A, member of RAS oncogene family	3656	0.221	0.2788	No
49	GPR18	GPR18 StanfordSource, GeneCards	G protein-coupled receptor 18	3727	0.212	0.2762	No
50	MAB21L1	MAB21L1 StanfordSource, GeneCards	mab-21-like 1 (C. elegans)	3763	0.208	0.2771	No
51	DCAMKL1	DCAMKL1 StanfordSource, GeneCards	doublecortin and CaM kinase-like 1	3780	0.206	0.2798	No
52	NUPL1	NUPL1 StanfordSource, GeneCards	nucleoporin like 1	3806	0.203	0.2816	No
53	DLEU2	DLEU2 StanfordSource, GeneCards	deleted in lymphocytic leukemia, 2	3890	0.195	0.2774	No
54	FLT3	FLT3 StanfordSource, GeneCards	fms-related tyrosine kinase 3	3909	0.193	0.2796	No
55	TGDS	TGDS StanfordSource, GeneCards	TDP-glucose 4,6-dehydratase	3942	0.188	0.2803	No
56	MTMR6	MTMR6 StanfordSource, GeneCards	myotubularin related protein 6	4015	0.178	0.2769	No
57	H3F3A	H3F3A StanfordSource, GeneCards	H3 histone, family 3A	4042	0.175	0.2779	No
58	PCDH8	PCDH8 StanfordSource, GeneCards	protocadherin 8	4208	0.155	0.2646	No
59	RFC3	RFC3 StanfordSource, GeneCards	replication factor C (activator 1) 3, 38kDa	4246	0.149	0.2640	No
60	FGF9	FGF9 StanfordSource, GeneCards	fibroblast growth factor 9 (glia-activating factor)	4259	0.148	0.2659	No
61	SLC7A1	SLC7A1 StanfordSource, GeneCards	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	4387	0.131	0.2559	No
62	HSMPP8	HSMPP8 StanfordSource, GeneCards	M-phase phosphoprotein, mpp8	4426	0.126	0.2547	No
63	KLF5	KLF5 StanfordSource, GeneCards	Kruppel-like factor 5 (intestinal)	4461	0.122	0.2539	No
64	ELF1	ELF1 StanfordSource, GeneCards	E74-like factor 1 (ets domain transcription factor)	4469	0.121	0.2557	No
65	ATP11A	ATP11A StanfordSource, GeneCards	ATPase, Class VI, type 11A	4545	0.110	0.2505	No
66	RAP2B	RAP2B StanfordSource, GeneCards	RAP2B, member of RAS oncogene family	4631	0.099	0.2440	No
67	CG018	CG018 StanfordSource, GeneCards	hypothetical gene CG018	4693	0.092	0.2398	No
68	GPC5	GPC5 StanfordSource, GeneCards	glypican 5	4847	0.075	0.2260	No
69	COL4A1	COL4A1 StanfordSource, GeneCards	collagen, type IV, alpha 1	4888	0.069	0.2234	No
70	FABP5	FABP5 StanfordSource, GeneCards	fatty acid binding protein 5 (psoriasis-associated)	5071	0.048	0.2061	No
71	KIAA0564	KIAA0564 StanfordSource, GeneCards	KIAA0564 protein	5256	0.025	0.1881	No
72	WBP4	WBP4 StanfordSource, GeneCards	WW domain binding protein 4 (formin binding protein 21)	5281	0.023	0.1861	No
73	ALOX5AP	ALOX5AP StanfordSource, GeneCards	arachidonate 5-lipoxygenase-activating protein	5282	0.023	0.1866	No
74	DLEU1	DLEU1 StanfordSource, GeneCards	deleted in lymphocytic leukemia, 1	5453	0.001	0.1695	No
75	EDNRB	EDNRB StanfordSource, GeneCards	endothelin receptor type B	5505	-0.005	0.1645	No
76	KIAA0853	KIAA0853 StanfordSource, GeneCards	KIAA0853	5524	-0.006	0.1628	No
77	SGCG	SGCG StanfordSource, GeneCards	sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)	5572	-0.012	0.1583	No
78	PCDH17	PCDH17 StanfordSource, GeneCards	protocadherin 17	5580	-0.014	0.1579	No
79	FARP1	FARP1 StanfordSource, GeneCards	FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	5623	-0.019	0.1541	No
80	WASF3	WASF3 StanfordSource, GeneCards	WAS protein family, member 3	5628	-0.020	0.1541	No
81	TPP2	TPP2 StanfordSource, GeneCards	tripeptidyl peptidase II	5639	-0.021	0.1535	No
82	TDRD3	TDRD3 StanfordSource, GeneCards	tudor domain containing 3	5833	-0.044	0.1350	No
83	LOC93081	LOC93081 StanfordSource, GeneCards	hypothetical protein BC015148	6030	-0.069	0.1167	No
84	PSPC1	PSPC1 StanfordSource, GeneCards	paraspeckle component 1	6041	-0.070	0.1172	No
85	MYR8	MYR8 StanfordSource, GeneCards	myosin heavy chain Myr 8	6284	-0.096	0.0949	No
86	PAM	PAM StanfordSource, GeneCards	peptidylglycine alpha-amidating monooxygenase	6313	-0.100	0.0942	No
87	CLDN10	CLDN10 StanfordSource, GeneCards	claudin 10	6315	-0.100	0.0962	No
88	TM9SF2	TM9SF2 StanfordSource, GeneCards	transmembrane 9 superfamily member 2	6335	-0.102	0.0964	No
89	IPF1	IPF1 StanfordSource, GeneCards	insulin promoter factor 1, homeodomain transcription factor	6355	-0.104	0.0967	No
90	RFXAP	RFXAP StanfordSource, GeneCards	regulatory factor X-associated protein	6467	-0.116	0.0880	No
91	KCTD12	KCTD12 StanfordSource, GeneCards	potassium channel tetramerisation domain containing 12	6475	-0.117	0.0898	No
92	CUL4A	CUL4A StanfordSource, GeneCards	cullin 4A	6503	-0.121	0.0896	No
93	ATP7B	ATP7B StanfordSource, GeneCards	ATPase, Cu++ transporting, beta polypeptide (Wilson disease)	6543	-0.126	0.0883	No
94	SLC10A2	SLC10A2 StanfordSource, GeneCards	solute carrier family 10 (sodium/bile acid cotransporter family), member 2	6574	-0.130	0.0880	No
95	RPL21	RPL21 StanfordSource, GeneCards	ribosomal protein L21	6599	-0.133	0.0884	No
96	TFDP1	TFDP1 StanfordSource, GeneCards	transcription factor Dp-1	6854	-0.163	0.0663	No
97	TPT1	TPT1 StanfordSource, GeneCards	tumor protein, translationally-controlled 1	6970	-0.176	0.0584	No
98	HSPH1	HSPH1 StanfordSource, GeneCards	heat shock 105kDa/110kDa protein 1	7030	-0.182	0.0563	No
99	KLF12	KLF12 StanfordSource, GeneCards	Kruppel-like factor 12	7077	-0.188	0.0556	No
100	TNFSF11	TNFSF11 StanfordSource, GeneCards	tumor necrosis factor (ligand) superfamily, member 11	7136	-0.193	0.0539	No
101	KPNA3	KPNA3 StanfordSource, GeneCards	karyopherin alpha 3 (importin alpha 4)	7138	-0.193	0.0578	No
102	SLC15A1	SLC15A1 StanfordSource, GeneCards	solute carrier family 15 (oligopeptide transporter), member 1	7170	-0.197	0.0589	No
103	MBNL2	MBNL2 StanfordSource, GeneCards	muscleblind-like 2 (Drosophila)	7239	-0.202	0.0563	No
104	SCEL	SCEL StanfordSource, GeneCards	sciellin	7444	-0.225	0.0405	No
105	DNAJC3	DNAJC3 StanfordSource, GeneCards	DnaJ (Hsp40) homolog, subfamily C, member 3	7491	-0.230	0.0407	No
106	NEK3	NEK3 StanfordSource, GeneCards	NIMA (never in mitosis gene a)-related kinase 3	7721	-0.260	0.0231	No
107	RFP2	RFP2 StanfordSource, GeneCards	ret finger protein 2	7787	-0.268	0.0222	No
108	LAMP1	LAMP1 StanfordSource, GeneCards	lysosomal-associated membrane protein 1	7788	-0.268	0.0279	No
109	BRCA2	BRCA2 StanfordSource, GeneCards	breast cancer 2, early onset	7886	-0.283	0.0241	No
110	LCP1	LCP1 StanfordSource, GeneCards	lymphocyte cytosolic protein 1 (L-plastin)	7905	-0.286	0.0283	No
111	ITGBL1	ITGBL1 StanfordSource, GeneCards	integrin, beta-like 1 (with EGF-like repeat domains)	7943	-0.291	0.0307	No
112	SPG20	SPG20 StanfordSource, GeneCards	spastic paraplegia 20, spartin (Troyer syndrome)	8054	-0.307	0.0261	No
113	COL4A2	COL4A2 StanfordSource, GeneCards	collagen, type IV, alpha 2	8217	-0.331	0.0168	No
114	PROZ	PROZ StanfordSource, GeneCards	protein Z, vitamin K-dependent plasma glycoprotein	8239	-0.335	0.0218	No
115	FLJ13639	FLJ13639 StanfordSource, GeneCards	hypothetical protein FLJ13639	8407	-0.367	0.0127	No
116	ITM2B	ITM2B StanfordSource, GeneCards	integral membrane protein 2B	8476	-0.380	0.0139	No
117	FLT1	FLT1 StanfordSource, GeneCards	fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)	8809	-0.449	-0.0101	No
118	IRS2	IRS2 StanfordSource, GeneCards	insulin receptor substrate 2	8863	-0.460	-0.0057	No
119	HTR2A	HTR2A StanfordSource, GeneCards	5-hydroxytryptamine (serotonin) receptor 2A	8896	-0.468	0.0009	No
120	INHBC	INHBC StanfordSource, GeneCards	inhibin, beta C	8994	-0.486	0.0014	No
121	CDX2	CDX2 StanfordSource, GeneCards	caudal type homeo box transcription factor 2	9007	-0.489	0.0105	No
122	CPB2	CPB2 StanfordSource, GeneCards	carboxypeptidase B2 (plasma, carboxypeptidase U)	9019	-0.492	0.0198	No
123	ABCC4	ABCC4 StanfordSource, GeneCards	ATP-binding cassette, sub-family C (CFTR/MRP), member 4	9103	-0.507	0.0221	No
124	DCT	DCT StanfordSource, GeneCards	dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	9254	-0.546	0.0185	No
125	13CDNA73	13CDNA73 StanfordSource, GeneCards	hypothetical protein CG003	9458	-0.610	0.0110	No
126	EBI2	EBI2 StanfordSource, GeneCards	Epstein-Barr virus induced gene 2 (lymphocyte-specific G protein-coupled receptor)	9776	-0.748	-0.0052	No
127	CCNA1	CCNA1 StanfordSource, GeneCards	cyclin A1	9795	-0.761	0.0091	No
128	ATP8A2	ATP8A2 StanfordSource, GeneCards	ATPase, aminophospholipid transporter-like, Class I, type 8A, member 2	9853	-0.806	0.0203	No