DatasetLeukemia_collapsed.gct
PhenotypeAML
GeneSetC1.symbols.gmt#chr4q13
Enrichment Score (ES)-0.34253493
Normalized Enrichment Score (NES)-1.2123511
Nominal p-value0.20348836
FDR q-value1.0
FWER p-Value0.982
Table: GSEA Results Summary

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERESCORE_ENRICHMENT
1DCKDCK
StanfordSource,  GeneCards
deoxycytidine kinase731.2390.0796No
2ANKRD17ANKRD17
StanfordSource,  GeneCards
ankyrin repeat domain 178420.7270.0539No
3UGT2B4UGT2B4
StanfordSource,  GeneCards
UDP glycosyltransferase 2 family, polypeptide B417900.510-0.0048No
4UGT2B11UGT2B11
StanfordSource,  GeneCards
UDP glycosyltransferase 2 family, polypeptide B1123770.413-0.0344No
5GCGC
StanfordSource,  GeneCards
group-specific component (vitamin D binding protein)23850.412-0.0062No
6PPBPL2PPBPL2
StanfordSource,  GeneCards
pro-platelet basic protein-like 226510.369-0.0068No
7IGJIGJ
StanfordSource,  GeneCards
immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides27250.3580.0111No
8PROL1PROL1
StanfordSource,  GeneCards
proline rich 128090.3440.0269No
9CENPC1CENPC1
StanfordSource,  GeneCards
centromere protein C 129220.3270.0386No
10GNRHRGNRHR
StanfordSource,  GeneCards
gonadotropin-releasing hormone receptor36900.219-0.0226No
11AFMAFM
StanfordSource,  GeneCards
afamin37720.207-0.0162No
12CSN3CSN3
StanfordSource,  GeneCards
casein kappa39230.191-0.0178No
13CXCL6CXCL6
StanfordSource,  GeneCards
chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)39350.188-0.0056No
14CSN2CSN2
StanfordSource,  GeneCards
casein beta40440.175-0.0041No
15UGT2A1UGT2A1
StanfordSource,  GeneCards
UDP glycosyltransferase 2 family, polypeptide A142450.149-0.0136No
16MUC7MUC7
StanfordSource,  GeneCards
mucin 7, salivary46350.099-0.0455No
17AFPAFP
StanfordSource,  GeneCards
alpha-fetoprotein50350.052-0.0817No
18SLC4A4SLC4A4
StanfordSource,  GeneCards
solute carrier family 4, sodium bicarbonate cotransporter, member 451680.036-0.0924No
19PF4V1PF4V1
StanfordSource,  GeneCards
platelet factor 4 variant 152260.029-0.0960No
20BTCBTC
StanfordSource,  GeneCards
betacellulin5897-0.054-0.1591No
21UGT2B7UGT2B7
StanfordSource,  GeneCards
UDP glycosyltransferase 2 family, polypeptide B76011-0.067-0.1657No
22ADAMTS3ADAMTS3
StanfordSource,  GeneCards
a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 36314-0.100-0.1888No
23UGT2B17UGT2B17
StanfordSource,  GeneCards
UDP glycosyltransferase 2 family, polypeptide B177502-0.231-0.2911No
24ALBALB
StanfordSource,  GeneCards
albumin7789-0.269-0.3007No
25CSN1S1CSN1S1
StanfordSource,  GeneCards
casein alpha s17962-0.294-0.2973No
26CXCL5CXCL5
StanfordSource,  GeneCards
chemokine (C-X-C motif) ligand 58067-0.309-0.2860No
27CXCL1CXCL1
StanfordSource,  GeneCards
chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)8196-0.328-0.2758No
28AREGAREG
StanfordSource,  GeneCards
amphiregulin (schwannoma-derived growth factor)8866-0.461-0.3102Yes
29CXCL3CXCL3
StanfordSource,  GeneCards
chemokine (C-X-C motif) ligand 39064-0.500-0.2948Yes
30PF4PF4
StanfordSource,  GeneCards
platelet factor 4 (chemokine (C-X-C motif) ligand 4)9077-0.501-0.2608Yes
31PPBPPPBP
StanfordSource,  GeneCards
pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)9230-0.539-0.2382Yes
32UGT2B15UGT2B15
StanfordSource,  GeneCards
UDP glycosyltransferase 2 family, polypeptide B159348-0.573-0.2097Yes
33EREGEREG
StanfordSource,  GeneCards
epiregulin9394-0.588-0.1729Yes
34EPHA5EPHA5
StanfordSource,  GeneCards
EphA59738-0.724-0.1563Yes
35CXCL2CXCL2
StanfordSource,  GeneCards
chemokine (C-X-C motif) ligand 29744-0.727-0.1058Yes
36STATHSTATH
StanfordSource,  GeneCards
statherin9971-0.923-0.0636Yes
37IL8IL8
StanfordSource,  GeneCards
interleukin 810016-1.0260.0039Yes
Table: GSEA details [plain text format]



Fig 1: GSEA_Results   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List



Fig 2: Leukemia_collapsed.gct   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: Null Distribution for chr4q13   
Histogram of random enrichment scores (real ES = -0.34253493 )