Details for gene set chr6p21[GSEA]

Table: GSEA Results Summary

Dataset	Leukemia_collapsed.gct
Phenotype	ALL
GeneSet	C1.symbols.gmt#chr6p21
Enrichment Score (ES)	0.35249677
Normalized Enrichment Score (NES)	1.416689
Nominal p-value	0.10606061
FDR q-value	0.55131257
FWER p-Value	0.883

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RES	CORE_ENRICHMENT
1	PSMB9	PSMB9 StanfordSource, GeneCards	proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional protease 2)	25	1.495	0.0187	Yes
2	NFYA	NFYA StanfordSource, GeneCards	nuclear transcription factor Y, alpha	26	1.488	0.0399	Yes
3	KIAA0240	KIAA0240 StanfordSource, GeneCards	KIAA0240	117	1.162	0.0474	Yes
4	HLA-DMB	HLA-DMB StanfordSource, GeneCards	major histocompatibility complex, class II, DM beta	159	1.098	0.0588	Yes
5	HLA-DPB1	HLA-DPB1 StanfordSource, GeneCards	major histocompatibility complex, class II, DP beta 1	170	1.086	0.0733	Yes
6	KIAA0082	KIAA0082 StanfordSource, GeneCards	KIAA0082	261	0.993	0.0783	Yes
7	MICB	MICB StanfordSource, GeneCards	MHC class I polypeptide-related sequence B	262	0.993	0.0925	Yes
8	HLA-DPA1	HLA-DPA1 StanfordSource, GeneCards	major histocompatibility complex, class II, DP alpha 1	267	0.990	0.1061	Yes
9	BAT3	BAT3 StanfordSource, GeneCards	HLA-B associated transcript 3	310	0.955	0.1155	Yes
10	HLA-DQB1	HLA-DQB1 StanfordSource, GeneCards	major histocompatibility complex, class II, DQ beta 1	379	0.919	0.1217	Yes
11	ZNF318	ZNF318 StanfordSource, GeneCards	zinc finger protein 318	385	0.916	0.1342	Yes
12	TAP1	TAP1 StanfordSource, GeneCards	transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)	396	0.911	0.1462	Yes
13	STK38	STK38 StanfordSource, GeneCards	serine/threonine kinase 38	522	0.843	0.1456	Yes
14	DOM3Z	DOM3Z StanfordSource, GeneCards	dom-3 homolog Z (C. elegans)	528	0.840	0.1570	Yes
15	BAT8	BAT8 StanfordSource, GeneCards	HLA-B associated transcript 8	533	0.839	0.1685	Yes
16	RGL2	RGL2 StanfordSource, GeneCards	ral guanine nucleotide dissociation stimulator-like 2	571	0.821	0.1765	Yes
17	LTB	LTB StanfordSource, GeneCards	lymphotoxin beta (TNF superfamily, member 3)	591	0.816	0.1862	Yes
18	ITPR3	ITPR3 StanfordSource, GeneCards	inositol 1,4,5-triphosphate receptor, type 3	627	0.802	0.1940	Yes
19	LSM2	LSM2 StanfordSource, GeneCards	LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	662	0.792	0.2019	Yes
20	RDBP	RDBP StanfordSource, GeneCards	RD RNA binding protein	700	0.777	0.2092	Yes
21	C6orf130	C6orf130 StanfordSource, GeneCards	chromosome 6 open reading frame 130	767	0.755	0.2133	Yes
22	TRIM26	TRIM26 StanfordSource, GeneCards	tripartite motif-containing 26	771	0.753	0.2237	Yes
23	DDR1	DDR1 StanfordSource, GeneCards	discoidin domain receptor family, member 1	802	0.744	0.2312	Yes
24	HLA-DMA	HLA-DMA StanfordSource, GeneCards	major histocompatibility complex, class II, DM alpha	812	0.739	0.2408	Yes
25	RING1	RING1 StanfordSource, GeneCards	ring finger protein 1	820	0.737	0.2506	Yes
26	CCND3	CCND3 StanfordSource, GeneCards	cyclin D3	855	0.723	0.2575	Yes
27	ZNF76	ZNF76 StanfordSource, GeneCards	zinc finger protein 76 (expressed in testis)	858	0.723	0.2676	Yes
28	TAP2	TAP2 StanfordSource, GeneCards	transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	887	0.711	0.2749	Yes
29	PBX2	PBX2 StanfordSource, GeneCards	pre-B-cell leukemia transcription factor 2	956	0.689	0.2778	Yes
30	ZNF297	ZNF297 StanfordSource, GeneCards	zinc finger protein 297	976	0.684	0.2856	Yes
31	FLOT1	FLOT1 StanfordSource, GeneCards	flotillin 1	978	0.683	0.2952	Yes
32	HCP5	HCP5 StanfordSource, GeneCards	HLA complex P5	1022	0.671	0.3004	Yes
33	DAXX	DAXX StanfordSource, GeneCards	death-associated protein 6	1145	0.643	0.2973	Yes
34	AGER	AGER StanfordSource, GeneCards	advanced glycosylation end product-specific receptor	1192	0.634	0.3016	Yes
35	VPS52	VPS52 StanfordSource, GeneCards	vacuolar protein sorting 52 (yeast)	1269	0.618	0.3028	Yes
36	SKIV2L	SKIV2L StanfordSource, GeneCards	superkiller viralicidic activity 2-like (S. cerevisiae)	1355	0.598	0.3027	Yes
37	MICA	MICA StanfordSource, GeneCards	MHC class I polypeptide-related sequence A	1470	0.573	0.2993	Yes
38	HLA-DOA	HLA-DOA StanfordSource, GeneCards	major histocompatibility complex, class II, DO alpha	1581	0.550	0.2960	Yes
39	ABCF1	ABCF1 StanfordSource, GeneCards	ATP-binding cassette, sub-family F (GCN20), member 1	1593	0.547	0.3027	Yes
40	GLO1	GLO1 StanfordSource, GeneCards	glyoxalase I	1634	0.541	0.3064	Yes
41	BRD2	BRD2 StanfordSource, GeneCards	bromodomain containing 2	1691	0.528	0.3082	Yes
42	SNRPC	SNRPC StanfordSource, GeneCards	small nuclear ribonucleoprotein polypeptide C	1711	0.523	0.3137	Yes
43	CLIC5	CLIC5 StanfordSource, GeneCards	chloride intracellular channel 5	1757	0.516	0.3165	Yes
44	ANKS1	ANKS1 StanfordSource, GeneCards	ankyrin repeat and sterile alpha motif domain containing 1	1893	0.490	0.3099	Yes
45	HCG9	HCG9 StanfordSource, GeneCards	HLA complex group 9	1934	0.485	0.3127	Yes
46	CLPS	CLPS StanfordSource, GeneCards	colipase, pancreatic	1976	0.478	0.3154	Yes
47	BTBD9	BTBD9 StanfordSource, GeneCards	BTB (POZ) domain containing 9	1999	0.474	0.3199	Yes
48	HLA-E	HLA-E StanfordSource, GeneCards	major histocompatibility complex, class I, E	2040	0.467	0.3225	Yes
49	MRPS18B	MRPS18B StanfordSource, GeneCards	mitochondrial ribosomal protein S18B	2048	0.466	0.3285	Yes
50	BAT1	BAT1 StanfordSource, GeneCards	HLA-B associated transcript 1	2065	0.462	0.3334	Yes
51	BF	BF StanfordSource, GeneCards	B-factor, properdin	2094	0.457	0.3371	Yes
52	DHX16	DHX16 StanfordSource, GeneCards	DEAH (Asp-Glu-Ala-His) box polypeptide 16	2167	0.445	0.3362	Yes
53	MSH5	MSH5 StanfordSource, GeneCards	mutS homolog 5 (E. coli)	2179	0.443	0.3414	Yes
54	RDS	RDS StanfordSource, GeneCards	retinal degeneration, slow	2213	0.437	0.3442	Yes
55	MEA	MEA StanfordSource, GeneCards	male-enhanced antigen	2243	0.433	0.3475	Yes
56	MDC1	MDC1 StanfordSource, GeneCards	mediator of DNA damage checkpoint 1	2255	0.431	0.3525	Yes
57	HLA-DOB	HLA-DOB StanfordSource, GeneCards	major histocompatibility complex, class II, DO beta	2624	0.373	0.3206	No
58	DDAH2	DDAH2 StanfordSource, GeneCards	dimethylarginine dimethylaminohydrolase 2	2742	0.355	0.3139	No
59	PPP1R11	PPP1R11 StanfordSource, GeneCards	protein phosphatase 1, regulatory (inhibitor) subunit 11	2750	0.353	0.3182	No
60	GTF2H4	GTF2H4 StanfordSource, GeneCards	general transcription factor IIH, polypeptide 4, 52kDa	2765	0.350	0.3218	No
61	HKE2	HKE2 StanfordSource, GeneCards	HLA class II region expressed gene KE2	2933	0.325	0.3095	No
62	BYSL	BYSL StanfordSource, GeneCards	bystin-like	2961	0.321	0.3114	No
63	PSMB8	PSMB8 StanfordSource, GeneCards	proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional protease 7)	2968	0.320	0.3153	No
64	SRPK1	SRPK1 StanfordSource, GeneCards	SFRS protein kinase 1	2982	0.319	0.3186	No
65	NEU1	NEU1 StanfordSource, GeneCards	sialidase 1 (lysosomal sialidase)	3001	0.317	0.3212	No
66	TUBB2	TUBB2 StanfordSource, GeneCards	tubulin, beta, 2	3211	0.287	0.3042	No
67	PTK7	PTK7 StanfordSource, GeneCards	PTK7 protein tyrosine kinase 7	3275	0.278	0.3018	No
68	MAPK13	MAPK13 StanfordSource, GeneCards	mitogen-activated protein kinase 13	3344	0.267	0.2988	No
69	TBCC	TBCC StanfordSource, GeneCards	tubulin-specific chaperone c	3371	0.262	0.2999	No
70	MAPK14	MAPK14 StanfordSource, GeneCards	mitogen-activated protein kinase 14	3413	0.256	0.2993	No
71	CUL7	CUL7 StanfordSource, GeneCards	cullin 7	3796	0.204	0.2637	No
72	RNF8	RNF8 StanfordSource, GeneCards	ring finger protein (C3HC4 type) 8	3971	0.183	0.2487	No
73	HSD17B8	HSD17B8 StanfordSource, GeneCards	hydroxysteroid (17-beta) dehydrogenase 8	4000	0.180	0.2484	No
74	C6orf109	C6orf109 StanfordSource, GeneCards	chromosome 6 open reading frame 109	4204	0.156	0.2302	No
75	HLA-DRA	HLA-DRA StanfordSource, GeneCards	major histocompatibility complex, class II, DR alpha	4219	0.154	0.2309	No
76	RNF5	RNF5 StanfordSource, GeneCards	ring finger protein 5	4289	0.144	0.2260	No
77	HSPCB	HSPCB StanfordSource, GeneCards	heat shock 90kDa protein 1, beta	4317	0.140	0.2253	No
78	SRF	SRF StanfordSource, GeneCards	serum response factor (c-fos serum response element-binding transcription factor)	4337	0.137	0.2253	No
79	CAPN11	CAPN11 StanfordSource, GeneCards	calpain 11	4633	0.099	0.1969	No
80	POLR1C	POLR1C StanfordSource, GeneCards	polymerase (RNA) I polypeptide C, 30kDa	4774	0.083	0.1840	No
81	CDKN1A	CDKN1A StanfordSource, GeneCards	cyclin-dependent kinase inhibitor 1A (p21, Cip1)	4801	0.080	0.1825	No
82	TNF	TNF StanfordSource, GeneCards	tumor necrosis factor (TNF superfamily, member 2)	4855	0.074	0.1782	No
83	C6orf18	C6orf18 StanfordSource, GeneCards	chromosome 6 open reading frame 18	4900	0.068	0.1747	No
84	PHF1	PHF1 StanfordSource, GeneCards	PHD finger protein 1	5248	0.026	0.1401	No
85	PEX6	PEX6 StanfordSource, GeneCards	peroxisomal biogenesis factor 6	5331	0.016	0.1320	No
86	APOBEC2	APOBEC2 StanfordSource, GeneCards	apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2	5484	-0.003	0.1167	No
87	C6orf11	C6orf11 StanfordSource, GeneCards	chromosome 6 open reading frame 11	5582	-0.015	0.1071	No
88	CYP21A2	CYP21A2 StanfordSource, GeneCards	cytochrome P450, family 21, subfamily A, polypeptide 2	5640	-0.021	0.1017	No
89	MOCS1	MOCS1 StanfordSource, GeneCards	molybdenum cofactor synthesis 1	5896	-0.054	0.0767	No
90	TULP1	TULP1 StanfordSource, GeneCards	tubby like protein 1	5926	-0.058	0.0746	No
91	SLC39A7	SLC39A7 StanfordSource, GeneCards	solute carrier family 39 (zinc transporter), member 7	5987	-0.064	0.0694	No
92	HLA-A	HLA-A StanfordSource, GeneCards	major histocompatibility complex, class I, A	6033	-0.069	0.0659	No
93	CDC5L	CDC5L StanfordSource, GeneCards	CDC5 cell division cycle 5-like (S. pombe)	6197	-0.087	0.0507	No
94	CLIC1	CLIC1 StanfordSource, GeneCards	chloride intracellular channel 1	6225	-0.091	0.0492	No
95	PPT2	PPT2 StanfordSource, GeneCards	palmitoyl-protein thioesterase 2	6360	-0.105	0.0372	No
96	SUPT3H	SUPT3H StanfordSource, GeneCards	suppressor of Ty 3 homolog (S. cerevisiae)	6363	-0.105	0.0385	No
97	TAPBP	TAPBP StanfordSource, GeneCards	TAP binding protein (tapasin)	6427	-0.112	0.0337	No
98	PPARD	PPARD StanfordSource, GeneCards	peroxisome proliferative activated receptor, delta	6486	-0.119	0.0295	No
99	PPP2R5D	PPP2R5D StanfordSource, GeneCards	protein phosphatase 2, regulatory subunit B (B56), delta isoform	6494	-0.120	0.0306	No
100	RXRB	RXRB StanfordSource, GeneCards	retinoid X receptor, beta	6582	-0.131	0.0236	No
101	MAD2L1BP	MAD2L1BP StanfordSource, GeneCards	MAD2L1 binding protein	6659	-0.140	0.0179	No
102	MDFI	MDFI StanfordSource, GeneCards	MyoD family inhibitor	6786	-0.155	0.0074	No
103	ABCC10	ABCC10 StanfordSource, GeneCards	ATP-binding cassette, sub-family C (CFTR/MRP), member 10	7332	-0.212	-0.0446	No
104	PPP1R10	PPP1R10 StanfordSource, GeneCards	protein phosphatase 1, regulatory subunit 10	7342	-0.213	-0.0425	No
105	AGPAT1	AGPAT1 StanfordSource, GeneCards	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha)	7382	-0.218	-0.0433	No
106	KIFC1	KIFC1 StanfordSource, GeneCards	kinesin family member C1	7408	-0.221	-0.0427	No
107	BAT2	BAT2 StanfordSource, GeneCards	HLA-B associated transcript 2	7465	-0.228	-0.0451	No
108	NOTCH4	NOTCH4 StanfordSource, GeneCards	Notch homolog 4 (Drosophila)	7493	-0.230	-0.0446	No
109	AIF1	AIF1 StanfordSource, GeneCards	allograft inflammatory factor 1	7550	-0.238	-0.0468	No
110	MLN	MLN StanfordSource, GeneCards	motilin	7565	-0.240	-0.0448	No
111	TRIM31	TRIM31 StanfordSource, GeneCards	tripartite motif-containing 31	7647	-0.250	-0.0495	No
112	LTA	LTA StanfordSource, GeneCards	lymphotoxin alpha (TNF superfamily, member 1)	7671	-0.253	-0.0482	No
113	SLC29A1	SLC29A1 StanfordSource, GeneCards	solute carrier family 29 (nucleoside transporters), member 1	7695	-0.256	-0.0469	No
114	CDSN	CDSN StanfordSource, GeneCards	corneodesmosin	7698	-0.257	-0.0434	No
115	TNRC5	TNRC5 StanfordSource, GeneCards	trinucleotide repeat containing 5	7727	-0.262	-0.0425	No
116	GUCA1B	GUCA1B StanfordSource, GeneCards	guanylate cyclase activator 1B (retina)	7822	-0.273	-0.0481	No
117	TAF11	TAF11 StanfordSource, GeneCards	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa	7882	-0.282	-0.0501	No
118	RUNX2	RUNX2 StanfordSource, GeneCards	runt-related transcription factor 2	7885	-0.283	-0.0462	No
119	FKBP5	FKBP5 StanfordSource, GeneCards	FK506 binding protein 5	7887	-0.283	-0.0423	No
120	BAK1	BAK1 StanfordSource, GeneCards	BCL2-antagonist/killer 1	7891	-0.283	-0.0386	No
121	COL11A2	COL11A2 StanfordSource, GeneCards	collagen, type XI, alpha 2	7895	-0.284	-0.0349	No
122	RPS10	RPS10 StanfordSource, GeneCards	ribosomal protein S10	7952	-0.292	-0.0363	No
123	VARS2	VARS2 StanfordSource, GeneCards	valyl-tRNA synthetase 2	8005	-0.299	-0.0373	No
124	KLHDC3	KLHDC3 StanfordSource, GeneCards	kelch domain containing 3	8026	-0.303	-0.0351	No
125	NFKBIE	NFKBIE StanfordSource, GeneCards	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	8094	-0.312	-0.0374	No
126	IER3	IER3 StanfordSource, GeneCards	immediate early response 3	8216	-0.331	-0.0449	No
127	HMGA1	HMGA1 StanfordSource, GeneCards	high mobility group AT-hook 1	8336	-0.353	-0.0519	No
128	TRIM10	TRIM10 StanfordSource, GeneCards	tripartite motif-containing 10	8408	-0.367	-0.0538	No
129	LY6G6D	LY6G6D StanfordSource, GeneCards	lymphocyte antigen 6 complex, locus G6D	8429	-0.372	-0.0505	No
130	DSCR1L1	DSCR1L1 StanfordSource, GeneCards	Down syndrome critical region gene 1-like 1	8715	-0.431	-0.0732	No
131	POU5F1	POU5F1 StanfordSource, GeneCards	POU domain, class 5, transcription factor 1	8765	-0.440	-0.0719	No
132	NUDT3	NUDT3 StanfordSource, GeneCards	nudix (nucleoside diphosphate linked moiety X)-type motif 3	8921	-0.473	-0.0808	No
133	TEAD3	TEAD3 StanfordSource, GeneCards	TEA domain family member 3	9081	-0.502	-0.0897	No
134	ENPP4	ENPP4 StanfordSource, GeneCards	ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative function)	9109	-0.508	-0.0852	No
135	STK19	STK19 StanfordSource, GeneCards	serine/threonine kinase 19	9156	-0.521	-0.0825	No
136	LY6G6C	LY6G6C StanfordSource, GeneCards	lymphocyte antigen 6 complex, locus G6C	9182	-0.529	-0.0775	No
137	C6orf108	C6orf108 StanfordSource, GeneCards	chromosome 6 open reading frame 108	9198	-0.532	-0.0714	No
138	TNXB	TNXB StanfordSource, GeneCards	tenascin XB	9201	-0.533	-0.0640	No
139	GNMT	GNMT StanfordSource, GeneCards	glycine N-methyltransferase	9271	-0.550	-0.0632	No
140	APOM	APOM StanfordSource, GeneCards	apolipoprotein M	9319	-0.565	-0.0599	No
141	GRM4	GRM4 StanfordSource, GeneCards	glutamate receptor, metabotropic 4	9335	-0.569	-0.0533	No
142	PRR3	PRR3 StanfordSource, GeneCards	proline-rich polypeptide 3	9338	-0.570	-0.0454	No
143	DAAM2	DAAM2 StanfordSource, GeneCards	dishevelled associated activator of morphogenesis 2	9366	-0.580	-0.0399	No
144	CREBL1	CREBL1 StanfordSource, GeneCards	cAMP responsive element binding protein-like 1	9409	-0.593	-0.0357	No
145	PIM1	PIM1 StanfordSource, GeneCards	pim-1 oncogene	9413	-0.595	-0.0275	No
146	GNL1	GNL1 StanfordSource, GeneCards	guanine nucleotide binding protein-like 1	9496	-0.623	-0.0269	No
147	ATP6V1G2	ATP6V1G2 StanfordSource, GeneCards	ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G isoform 2	9562	-0.655	-0.0241	No
148	GUCA1A	GUCA1A StanfordSource, GeneCards	guanylate cyclase activator 1A (retina)	9801	-0.769	-0.0372	No
149	VEGF	VEGF StanfordSource, GeneCards	vascular endothelial growth factor	9812	-0.775	-0.0272	No
150	PGC	PGC StanfordSource, GeneCards	progastricsin (pepsinogen C)	9868	-0.817	-0.0211	No
151	TRIM15	TRIM15 StanfordSource, GeneCards	tripartite motif-containing 15	9959	-0.906	-0.0173	No
152	C2	C2 StanfordSource, GeneCards	complement component 2	9977	-0.936	-0.0057	No
153	GLP1R	GLP1R StanfordSource, GeneCards	glucagon-like peptide 1 receptor	9984	-0.950	0.0072	No