ATARiS

ATARiS is a computational method designed to analyze phenotypic readouts from multiple-sample RNAi screens in which each gene is targeted by multiple RNAi reagents. “ATARiS” stands for Analytic Technique for Assessment of RNAi by Similarity.

Contact: 
Aviad Tsherniak (aviad@broadinstitute.org)
Publication Info: 
Title: 
ATARiS: Computational quantification of gene suppression phenotypes from multisample RNAi screens
Notes: 
Diane D Shao*, Aviad Tsherniak*, Shuba Gopal, Barbara A Weir, Pablo Tamayo, Nicolas Stransky, Steven E Schumacher, Travis I Zack, Rameen Beroukhim, Levi A Garraway, Adam A Margolin, David E Root, William C Hahn, and Jill P Mesirov. Genome Res. 2013 Apr;23(4):665-78. doi: 10.1101/gr.143586.112. Epub 2012 Dec 26.