Section 2. Read Stats

Figure 2.1 Coverage Line Plot and GC

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Figure 2.2 Scaffold GC Coverage Histogram

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Table 2.3 Simple BAM Stats

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Table 2.4 Sequence Coverage Stats

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Table 2.5 Physical Coverage Stats

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Table 2.6 Insert Size Stats

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Figure 2.7 Scaffold Insert Size

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Figure 2.8 Coverage Anomalies Scatter Plot

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Figure 2.9 Scaffold Coverage Anomalies Cluster Length Plot

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Figure 2.10 Scaffold Coverage Anomalies Change in Coverage Scatter Plot

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Figure 2.11 Scaffold Coverage Anomalies Change in Coverage Histogram

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