How do I get TranspoSeq?
Source Code
Download the source: TranspoSeq_v2.0.tar.gz
Reference Files
TranspoSeq requires reference files of approximately 9G (compressed). These can either be downloaded in bulk or in several downloads via the categorized table below.
| File | Download | Size |
|---|---|---|
| RepeatMasker (Hg18) | RepeatMasker_Hg18.tar.gz | 46 MB |
| RepeatMasker (Hg19) | RepeatMasker_Hg19.tar.gz | 54 MB |
| Reference Genome (Hg18) | RefGenome_Hg18.tar.gz | 4.3 GB |
| Reference Genome (Hg19) | RefGenome_Hg19.tar.gz | 2.7 GB |
| RefSeq Genes (Hg18, Hg19) | RefSeqGenes.tar.gz | 5.6 MB |
| Previously annotated RIPs (Hg18, Hg19) | RIPs.tar.gz | 5.1 MB |
| Miscellaneous files | Misc.tar.gz | 1.1 MB |
| Sam* jar file | sam.jar | 528 KB |
| All Required Reference Files | TranspoSeq_Reffiles.tar.gz | 8.9 GB |