Difference between revisions of "Quick reference"
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| − | <br />For descriptions of the GSEA windows and menu bar, use the following links. <br />These are the help pages displayed when you click a help button in the GSEA application.<br /><br />Menu bar: <br />GSEA main window: <br />Load Data page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Load_Data_Page]<br />Run GSEA page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Run_GSEA_Page]<br /> Select One or More Phenotypes: <br />[http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Select_One_or_More_Phenotypes_Windo]<br />Leading Edge Analysis page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Leading_Edge_Analysis_Page]<br />Chip-to-Chip page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Chip2Chip_Page]<br />Browse MSigDB page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Browse_MSigDB_Page]<br />Analysis History page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Analysis_History_Page]<br />GSEA Preranked page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Preranked_Page]<br />Collapse Dataset page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Collapse_Dataset_Page]<br />Preferences window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Preferences_Window] | + | <br /> |
| + | For descriptions of the GSEA windows and menu bar, use the following links. <br /> | ||
| + | These are the help pages displayed when you click a help button in the GSEA application.<br /> | ||
| + | <br /> | ||
| + | SERVER: {{SERVER}}<br /> | ||
| + | UG variable: [{{SERVER}}/gsea/doc/GSEAUserGuideFrame.html UG]<br /> | ||
| + | MSigDB variable: [{{SERVER}}/gsea/msigdb/msigdb_index.html MSigDB]<br /> | ||
| + | Menu bar: [[../../../doc/GSEAUserGuideFrame.html|User Guide]]<br /> | ||
| + | GSEA main window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]<br /> | ||
| + | Load Data page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Load_Data_Page]<br /> | ||
| + | Run GSEA page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Run_GSEA_Page]<br /> | ||
| + | Select One or More Phenotypes: <br /> | ||
| + | [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Select_One_or_More_Phenotypes_Windo]<br /> | ||
| + | Leading Edge Analysis page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Leading_Edge_Analysis_Page]<br /> | ||
| + | Chip-to-Chip page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Chip2Chip_Page]<br /> | ||
| + | Browse MSigDB page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Browse_MSigDB_Page]<br /> | ||
| + | Analysis History page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Analysis_History_Page]<br /> | ||
| + | GSEA Preranked page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Preranked_Page]<br /> | ||
| + | Collapse Dataset page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Collapse_Dataset_Page]<br /> | ||
| + | Preferences window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Preferences_Window] | ||
Latest revision as of 12:38, 12 January 2007
For descriptions of the GSEA windows and menu bar, use the following links.
These are the help pages displayed when you click a help button in the GSEA application.
SERVER: https://software.broadinstitute.org
UG variable: UG
MSigDB variable: MSigDB
Menu bar: [[../../../doc/GSEAUserGuideFrame.html|User Guide]]
GSEA main window: [1]
Load Data page: [2]
Run GSEA page: [3]
Select One or More Phenotypes:
[4]
Leading Edge Analysis page: [5]
Chip-to-Chip page: [6]
Browse MSigDB page: [7]
Analysis History page: [8]
GSEA Preranked page: [9]
Collapse Dataset page: [10]
Preferences window: [11]
