Difference between revisions of "Mapping between v3.1 and v3.0 gene sets"
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<h1>C4 collection</h1> | <h1>C4 collection</h1> | ||
+ | <table width=600 cellspacing="4" cellpadding="4" border="3" align="" summary="" style="border-collapse: collapse;"> | ||
+ | <tbody> | ||
+ | <tr> | ||
+ | <td><strong>v3.0 (old) </strong></td> | ||
+ | <td><strong>v3.1 (new)</strong></td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td></td> | ||
+ | <td></td> | ||
+ | </tr> | ||
+ | </tbody> | ||
+ | </table> |
Revision as of 19:13, 2 October 2012
This page only includes gene sets from v3.0 with direct counterparts in v3.1, or sets that became deprecated in v3.1.
C2 collection
<tbody> </tbody>v3.0 (old) | v3.1 (new) |
HOLLMAN_APOPTOSIS_VIA_CD40_UP | HOLLMANN_APOPTOSIS_VIA_CD40_UP |
HOLLMAN_APOPTOSIS_VIA_CD40_DN | HOLLMANN_APOPTOSIS_VIA_CD40_DN |
FARMER_BREAST_CANCER_APOCRINE VS LUMINAL | FARMER_BREAST_CANCER_APOCRINE_VS_LUMINAL |
SCHWAB_TARGETS_OF_BMYB_S427G_UP | SCHWAB_TARGETS_OF_BMYB_POLYMORPHIC_VARIANTS_UP |
SCHWAB_TARGETS_OF_BMYB_S427G_DN | SCHWAB_TARGETS_OF_BMYB_POLYMORPHIC_VARIANTS_DN |
IIZUKA_RECURRENT_LIVER_CANCER | IIZUKA_LIVER_CANCER_EARLY_RECURRENCE |
WELCSH_BRCA1_TARGETS_1_UP | WELCSH_BRCA1_TARGETS_UP |
WELCSH_BRCA1_TARGETS_1_DN | WELCSH_BRCA1_TARGETS_DN |
FOSTER_INFLAMMATORY_RESPONSE_LPS_UP | FOSTER_TOLERANT_MACROPHAGE_UP |
FOSTER_INFLAMMATORY_RESPONSE_LPS_DN | FOSTER_TOLERANT_MACROPHAGE_DN |
KAPOSI_LIVER_CANCER_POOR_SURVIVAL_UP | KAPOSI_LIVER_CANCER_MET_UP |
KAPOSI_LIVER_CANCER_POOR_SURVIVAL_DN | KAPOSI_LIVER_CANCER_MET_DN |
KORKOLA_TERATOMA_DN | deprecated: over 90% identity to another set |
KORKOLA_YOLK_SAC_TUMOR_DN | deprecated: over 90% identity to another set |
ZHOU_INFLAMMATORY_RESPONSE_LPS_DN | deprecated: over 90% identity to another set |
NAKAMURA_LUNG_CANCER_MARKERS | deprecated: over 90% identity to another set |
FARMER_BREAST_CANCER_CLUSTER_3 | deprecated: over 90% identity to another set |
FINETTI_BREAST_CANCER_BASAL_VS_LUMINAL | deprecated: over 90% identity to another set |
GRESHOCK_CANCER_COPY_NUMBER_DN | deprecated: over 90% identity to another set |
RUNNE_GENDER_EFFECT_DN | deprecated: size < 5 after mapping to human Entrez Gene IDs |
TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_SUSTAINDED_IN_ERYTHROCYTE_DN | deprecated: size < 5 after mapping to human Entrez Gene IDs |
MUELLER_X_LINKED_COPY_NUMBER_UP | deprecated: size < 5 after mapping to human Entrez Gene IDs |
MUELLER_X_LINKED_COPY_NUMBER_DN | deprecated: size < 5 after mapping to human Entrez Gene IDs |
VICENT_METASTASIS_DN | deprecated: size < 5 after mapping to human Entrez Gene IDs |
ACEVEDO_METHYLATED_IN_LIVER_CANCER_UP | deprecated: size > 2,000 after mapping to human Entrez Gene IDs |
BOYAULT_LIVER_CANCER_SUBCLASS_G5_UP | deprecated: size < 5 after mapping to human Entrez Gene IDs |
GUTIERREZ_MULTIPLE_MYELOMA_UP | deprecated: size < 5 after mapping to human Entrez Gene IDs |
GOVONI_GH1_TARGETS_24HR_DN | deprecated: size < 5 after mapping to human Entrez Gene IDs |
RUGO_ENVIRONMENTAL_STRESS_RESPONSE_UP | deprecated: the set has incorrect PMID and contains original members from another set |
RUGO_RESPONSE_TO_4NQO | deprecated: the set has incorrect PMID and contains original members from another set |
RUGO_RESPONSE_TO_GAMMA_RADIATION | deprecated: the set has incorrect PMID and contains original members from another set |
RUGO_STRESS_RESPONSE_SUBSET_F | deprecated: the set has incorrect PMID and contains original members from another set |
RUGO_STRESS_RESPONSE_SUBSET_G | deprecated: the set has incorrect PMID and contains original members from another set |
RUGO_STRESS_RESPONSE_SUBSET_H | deprecated: the set has incorrect PMID and contains original members from another set |
RUGO_UV_RESPONSE | deprecated: the set has incorrect PMID and contains original members from another set |
SCHWAB_TARGETS_OF_BMYB_I624M_UP | deprecated after review |
SCHWAB_TARGETS_OF_BMYB_I624M_DN | deprecated after review |
TOOKER_RESPONSE_TO_BEXAROTENE_UP | deprecated after review |
TOOKER_RESPONSE_TO_BEXAROTENE_DN | deprecated after review |
HSC_MATURE_FETAL | deprecated after review |
LEE_LIVER_CANCER_TOP50 | deprecated after review |
C4 collection
<tbody> </tbody>v3.0 (old) | v3.1 (new) |