Difference between revisions of "Software Acknowledgements"
m |
m |
||
| Line 19: | Line 19: | ||
</tr> | </tr> | ||
<tr style="height: 84pt;"> | <tr style="height: 84pt;"> | ||
| − | <td width="28%" style="padding: 0.75pt; width: 28%; height: 84pt; | + | <td width="28%" style="padding: 0.75pt; width: 28%; height: 84pt;">The R programming language[[image:Rlogo.jpg]]</td> |
| − | + | <td width="34%" style="padding: 0.75pt; width: 34%; height: 84pt;">Language that the GSEAP-P-R is written in</td> | |
| − | + | <td width="40%" style="padding: 0.75pt; width: 40%; height: 84pt;">[http://www.r-project.org/index.html www.r-project.org</td> | |
| − | |||
| − | <td width="34%" style="padding: 0.75pt; width: 34%; height: 84pt; | ||
| − | |||
| − | |||
| − | <td width="40%" style="padding: 0.75pt; width: 40%; height: 84pt; | ||
| − | |||
| − | |||
</tr> | </tr> | ||
<tr style="height: 64.5pt;"> | <tr style="height: 64.5pt;"> | ||
Revision as of 13:53, 16 October 2012
<a href="http://www.broadinstitute.org/gsea/">GSEA Home</a> |
<a href="http://www.broadinstitute.org/gsea/downloads.jsp">Downloads</a> |
<a href="http://www.broadinstitute.org/gsea/msigdb/">Molecular Signatures Database</a> |
<a href="http://www.broadinstitute.org/cancer/software/gsea/wiki/index.php/Main_Page">Documentation</a> |
<a href="http://www.broadinstitute.org/gsea/contact.jsp">Contact</a>
GSEA implementations use many software tools and libraries, several of which are open source or freely available. Our thanks to their developers.
<tbody> </tbody>| Jide Software | Java/Swing components | jidesoft.com |
The Java 2 Platform  |
Language that the GSEA desktop application is written in | java.sun.com |
The R programming language |
Language that the GSEAP-P-R is written in | [http://www.r-project.org/index.html www.r-project.org |
|
Intellij IDEA
|
An awesome integrated development environment for Java |
|
|
JGoodies |
Forms layout and java look and feel |
|
|
foxtrot |
Java event handling mechanism for GUI's. |
|
|
dom4j |
XML Parser |
|
|
itext
|
Java PDF library |
|
|
Jakarta POI (especially HSSF)
|
Java excel reporting |
|
|
JFreeChart
|
Graphing library for Java |
|
|
JUnit
|
Unit testing API |
|
|
log4j
|
Logging toolkit for Java |
|
|
Oro |
Regular expressions library in Java |
|
|
Trove |
High performance collections library from GNU |
|
|
ECS |
Element construction set (a HTML tag library from Apache <st1:place w:st="on"><st1:city w:st="on">Jakarta</st1:city></st1:place>) |
|
|
Xenu link sleuth |
Website broken link checker |
