Difference between revisions of "Mapping between v5.0 and v4.0 gene sets"
Jump to navigation
Jump to search
m |
m |
||
(7 intermediate revisions by the same user not shown) | |||
Line 2: | Line 2: | ||
<h2>C2 collection</h2> | <h2>C2 collection</h2> | ||
<table width=600 cellspacing="4" cellpadding="4" border="3" align="" summary="" style="border-collapse: collapse;"> | <table width=600 cellspacing="4" cellpadding="4" border="3" align="" summary="" style="border-collapse: collapse;"> | ||
− | |||
<tr><td><strong>v4.0 (old) </strong></td><td><strong>v5.0 (new)</strong></td><td>notes</td></tr> | <tr><td><strong>v4.0 (old) </strong></td><td><strong>v5.0 (new)</strong></td><td>notes</td></tr> | ||
− | <tr><td>PECE_MAMMARY_STEM_CELL_UP</td><td>PECE_MAMMARY_STEM_CELL_UP</td><td>changed members</td></tr> | + | <tr> |
− | <tr><td>PECE_MAMMARY_STEM_CELL_DN</td><td>PECE_MAMMARY_STEM_CELL_DN</td><td>changed members</td></tr> | + | <td>PECE_MAMMARY_STEM_CELL_UP</td> |
− | <tr><td>KOINUMA_COLON_CANCER_MSI_UP</td><td>KOINUMA_COLON_CANCER_MSI_UP</td><td>changed members</td></tr> | + | <td>PECE_MAMMARY_STEM_CELL_UP</td> |
− | <tr><td></td><td></td><td></td></tr> | + | <td>changed members</td> |
− | </ | + | </tr> |
+ | <tr> | ||
+ | <td>PECE_MAMMARY_STEM_CELL_DN</td> | ||
+ | <td>PECE_MAMMARY_STEM_CELL_DN</td> | ||
+ | <td>changed members</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>KOINUMA_COLON_CANCER_MSI_UP</td> | ||
+ | <td>KOINUMA_COLON_CANCER_MSI_UP</td> | ||
+ | <td>changed members</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td> VERHAAK_GLIOBLASTOMA_PRONEURAL</td> | ||
+ | <td> VERHAAK_GLIOBLASTOMA_PRONEURAL</td> | ||
+ | <td>changed members</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td> VERHAAK_GLIOBLASTOMA_NEURAL</td> | ||
+ | <td> VERHAAK_GLIOBLASTOMA_NEURAL</td> | ||
+ | <td>changed members</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td> VERHAAK_GLIOBLASTOMA_CLASSICAL</td> | ||
+ | <td> VERHAAK_GLIOBLASTOMA_CLASSICAL</td> | ||
+ | <td>changed members</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td> VERHAAK_GLIOBLASTOMA_MESENCHYMAL</td> | ||
+ | <td> VERHAAK_GLIOBLASTOMA_MESENCHYMAL</td> | ||
+ | <td>changed members</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_UP</td> | ||
+ | <td>HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_UP</td> | ||
+ | <td>changed members</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_DN</td> | ||
+ | <td>HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_DN</td> | ||
+ | <td>changed members</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_UP</td> | ||
+ | <td>AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_UP</td> | ||
+ | <td>changed members</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_DN</td> | ||
+ | <td>AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_DN</td> | ||
+ | <td>changed members</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>DURAND_STROMA_MAX_DN</td> | ||
+ | <td>DURAND_STROMA_S_UP</td> | ||
+ | <td>changed members, brief description and name</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>DURAND_STROMA_NS_UP</td> | ||
+ | <td>DURAND_STROMA_NS_UP</td> | ||
+ | <td>changed members, brief description and name</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>POTTI_5FU_SENSITIVITY </td> | ||
+ | <td>-</td> | ||
+ | <td>deprecated</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>POTTI_ADRIAMYCIN_SENSITIVITY </td> | ||
+ | <td>-</td> | ||
+ | <td>deprecated</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>POTTI_CYTOXAN_SENSITIVITY </td> | ||
+ | <td>-</td> | ||
+ | <td>deprecated</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>POTTI_DOCETAXEL_SENSITIVITY </td> | ||
+ | <td>-</td> | ||
+ | <td>deprecated</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>POTTI_ETOPOSIDE_SENSITIVITY </td> | ||
+ | <td>-</td> | ||
+ | <td>deprecated</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>POTTI_PACLITAXEL_SENSITIVITY </td> | ||
+ | <td>-</td> | ||
+ | <td>deprecated</td> | ||
+ | </tr> | ||
+ | <tr> | ||
+ | <td>POTTI_TOPOTECAN_SENSITIVITY </td> | ||
+ | <td>-</td> | ||
+ | <td>deprecated</td> | ||
+ | </tr> | ||
</table> | </table> |
Latest revision as of 12:06, 6 October 2016
This page only includes gene sets from v4.0 with direct counterparts in v5.0, or sets that became deprecated in v5.0.
C2 collection
v4.0 (old) | v5.0 (new) | notes |
PECE_MAMMARY_STEM_CELL_UP | PECE_MAMMARY_STEM_CELL_UP | changed members |
PECE_MAMMARY_STEM_CELL_DN | PECE_MAMMARY_STEM_CELL_DN | changed members |
KOINUMA_COLON_CANCER_MSI_UP | KOINUMA_COLON_CANCER_MSI_UP | changed members |
VERHAAK_GLIOBLASTOMA_PRONEURAL | VERHAAK_GLIOBLASTOMA_PRONEURAL | changed members |
VERHAAK_GLIOBLASTOMA_NEURAL | VERHAAK_GLIOBLASTOMA_NEURAL | changed members |
VERHAAK_GLIOBLASTOMA_CLASSICAL | VERHAAK_GLIOBLASTOMA_CLASSICAL | changed members |
VERHAAK_GLIOBLASTOMA_MESENCHYMAL | VERHAAK_GLIOBLASTOMA_MESENCHYMAL | changed members |
HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_UP | HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_UP | changed members |
HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_DN | HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_DN | changed members |
AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_UP | AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_UP | changed members |
AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_DN | AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_DN | changed members |
DURAND_STROMA_MAX_DN | DURAND_STROMA_S_UP | changed members, brief description and name |
DURAND_STROMA_NS_UP | DURAND_STROMA_NS_UP | changed members, brief description and name |
POTTI_5FU_SENSITIVITY | - | deprecated |
POTTI_ADRIAMYCIN_SENSITIVITY | - | deprecated |
POTTI_CYTOXAN_SENSITIVITY | - | deprecated |
POTTI_DOCETAXEL_SENSITIVITY | - | deprecated |
POTTI_ETOPOSIDE_SENSITIVITY | - | deprecated |
POTTI_PACLITAXEL_SENSITIVITY | - | deprecated |
POTTI_TOPOTECAN_SENSITIVITY | - | deprecated |