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| | <a href="http://www.broadinstitute.org/gsea/">GSEA Home</a> | <a href="http://www.broadinstitute.org/gsea/downloads.jsp">Downloads</a> | <a href="http://www.broadinstitute.org/gsea/msigdb/">Molecular Signatures Database</a> | Documentation | <a href="http://www.broadinstitute.org/gsea/contact.jsp">Contact</a><br /> | | <a href="http://www.broadinstitute.org/gsea/">GSEA Home</a> | <a href="http://www.broadinstitute.org/gsea/downloads.jsp">Downloads</a> | <a href="http://www.broadinstitute.org/gsea/msigdb/">Molecular Signatures Database</a> | Documentation | <a href="http://www.broadinstitute.org/gsea/contact.jsp">Contact</a><br /> |
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| − | This page describes the changes made to the gene set collections for Release 3.0 of the Molecular Signatures Database (MSigDB).<br /> | + | This page describes the changes made to the gene set collections for Release 3.0 of the Molecular Signatures Database (MSigDB).<font size="2" face="Arial"><o:p></o:p></font> <!--EndFragment--> |
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| − | The following table summarizes the changes in the collections.<br />
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| − | <tr style="height: 33.7pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial"><strong style="">COLLECTIONS<o:p></o:p></strong></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: 1pt 1pt 1pt medium; border-style: solid solid solid none; border-color: windowtext windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt; height: 33.7pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial"><strong style="">NUMBER OF SETS<o:p></o:p></strong></font></p>
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial"><strong style="">MARCH 2008 RELEASE<o:p></o:p></strong></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: 1pt 1pt 1pt medium; border-style: solid solid solid none; border-color: windowtext windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt; height: 33.7pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial"><strong style="">NUMBER OF SETS<o:p></o:p></strong></font></p>
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial"><strong style="">AUGUST 2010 RELEASE<o:p></o:p></strong></font></p>
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| − | </td>
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| − | </tr>
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| − | <tr style="height: 18.85pt;">
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| − | <td valign="top" width="148" style="width: 2.05in; border-right: 1pt solid windowtext; border-width: medium 1pt 1pt; border-style: none solid solid; border-color: -moz-use-text-color windowtext windowtext; padding: 0in 5.4pt; height: 18.85pt;">
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| − | <p class="Body1"><font size="2" face="Arial">C1: Positional gene sets<o:p></o:p></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: medium 1pt 1pt medium; border-style: none solid solid none; border-color: -moz-use-text-color windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt; height: 18.85pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial">386<o:p></o:p></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: medium 1pt 1pt medium; border-style: none solid solid none; border-color: -moz-use-text-color windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt; height: 18.85pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial">386<o:p></o:p></font></p>
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| − | </td>
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| − | </tr>
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| − | <tr style="">
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| − | <td valign="top" width="148" style="width: 2.05in; border-right: 1pt solid windowtext; border-width: medium 1pt 1pt; border-style: none solid solid; border-color: -moz-use-text-color windowtext windowtext; padding: 0in 5.4pt;">
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| − | <p class="Body1"><font size="2" face="Arial">C2: Curated gene sets<o:p></o:p></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: medium 1pt 1pt medium; border-style: none solid solid none; border-color: -moz-use-text-color windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial">1,892<o:p></o:p></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: medium 1pt 1pt medium; border-style: none solid solid none; border-color: -moz-use-text-color windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial">3,967<o:p></o:p></font></p>
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| − | </td>
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| − | </tr>
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| − | <tr style="">
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| − | <td valign="top" width="148" style="width: 2.05in; border-right: 1pt solid windowtext; border-width: medium 1pt 1pt; border-style: none solid solid; border-color: -moz-use-text-color windowtext windowtext; padding: 0in 5.4pt;">
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| − | <p class="Body1"><font size="2" face="Arial">C3: Motif gene sets<o:p></o:p></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: medium 1pt 1pt medium; border-style: none solid solid none; border-color: -moz-use-text-color windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial">837<o:p></o:p></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: medium 1pt 1pt medium; border-style: none solid solid none; border-color: -moz-use-text-color windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial">837<o:p></o:p></font></p>
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| − | </td>
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| − | </tr>
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| − | <tr style="">
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| − | <td valign="top" width="148" style="width: 2.05in; border-right: 1pt solid windowtext; border-width: medium 1pt 1pt; border-style: none solid solid; border-color: -moz-use-text-color windowtext windowtext; padding: 0in 5.4pt;">
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| − | <p class="Body1"><font size="2" face="Arial">C4: Computed gene sets<o:p></o:p></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: medium 1pt 1pt medium; border-style: none solid solid none; border-color: -moz-use-text-color windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial">883<o:p></o:p></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: medium 1pt 1pt medium; border-style: none solid solid none; border-color: -moz-use-text-color windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial">883<o:p></o:p></font></p>
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| − | </td>
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| − | </tr>
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| − | <tr style="">
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| − | <td valign="top" width="148" style="width: 2.05in; border-right: 1pt solid windowtext; border-width: medium 1pt 1pt; border-style: none solid solid; border-color: -moz-use-text-color windowtext windowtext; padding: 0in 5.4pt;">
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| − | <p class="Body1"><font size="2" face="Arial">C5: Gene ontology gene sets<o:p></o:p></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: medium 1pt 1pt medium; border-style: none solid solid none; border-color: -moz-use-text-color windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial">1,454<o:p></o:p></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: medium 1pt 1pt medium; border-style: none solid solid none; border-color: -moz-use-text-color windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial">1,454<o:p></o:p></font></p>
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| − | </td>
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| − | </tr>
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| − | <tr style="">
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| − | <td valign="top" width="148" style="width: 2.05in; border-right: 1pt solid windowtext; border-width: medium 1pt 1pt; border-style: none solid solid; border-color: -moz-use-text-color windowtext windowtext; padding: 0in 5.4pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial"><strong style="">TOTAL<o:p></o:p></strong></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: medium 1pt 1pt medium; border-style: none solid solid none; border-color: -moz-use-text-color windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial">5,452<o:p></o:p></font></p>
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| − | </td>
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| − | <td valign="top" width="148" style="width: 2.05in; border-width: medium 1pt 1pt medium; border-style: none solid solid none; border-color: -moz-use-text-color windowtext windowtext -moz-use-text-color; padding: 0in 5.4pt;">
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| − | <p align="center" style="text-align: center;" class="Body1"><font size="2" face="Arial">7,517<o:p></o:p></font></p>
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| − | </td>
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| − | </tr>
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| − | </tbody>
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| − | </table>
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| − | <!--EndFragment--> | |
| | <h3><font face="Arial">C1: Positional gene sets</font></h3> | | <h3><font face="Arial">C1: Positional gene sets</font></h3> |
| | No changes were made in the C1 gene sets. For a description of this collection, see the <a href="http://www.broad.mit.edu/gsea/msigdb/collections.jsp">Browse Collections</a> page. | | No changes were made in the C1 gene sets. For a description of this collection, see the <a href="http://www.broad.mit.edu/gsea/msigdb/collections.jsp">Browse Collections</a> page. |
