MediaWiki:Sidebar

• Fake
  • mainpage|Fake nav item
  • Known_Issues|Another Fake Nav Item

• Navigation
  • mainpage|Documentation Home
  • http://www.broad.mit.edu/cancer/software/gsea/doc/desktop_tutorial.html%7CTutorial ^
  • http://www.broad.mit.edu/cancer/software/gsea/doc/GSEAUserGuideFrame.htm%7CUser Guide ^
  • data_formats|Data Formats
  • faq|FAQ
  • Known_Issues|Known Issues
  • R-GSEA_Readme|R-GSEA Readme
  • Gsea_Algorithm|Algorithm
  • http://www.broad.mit.edu/cancer/software/gsea/resources/datasets_index.html%7CPNAS 2005 Examples ^
  • gsea_papers|Papers that use GSEA

• MSigDB
  • gene_set_card_guide|Guide to a GeneSetCard
  • msigdb_dtd|Document Type Definition (DTD) for MSigDB
  • msigdb_v2_release_notes|MSigDB v2 Release Notes
  • msigdb_mapping_v1_to_v2|Mapping between v1 and v2 gene sets
  • Archived_Release_Notes|Archived Release Notes
  • mSigDB_License|MSigDB License
  • mSigDB_Acknowledgements|MSigDB Acknowledgements

• Software
  • http://www.broad.mit.edu/gsea/doc/whats_new.html%7CSoftware Version 2 Release Notes ^
  • Java_src_code|Java Source Code Usage Guide
  • http://www.broad.mit.edu/gsea/javadoc%7CJavaDoc
  • Archived_Release_Notes|Archived Release Notes
  • license_info|Software License
  • software_Acknowledgements|Software Acknowledgements
  • Gsea_at_the_Broad|For Broad Users

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• Internal only
  • gsea_wiki_notes|Wiki How-to-Use
  • gsea_enhancements|Bugs and Enhancements
  • context_sensitive_help_pages|Context Sensitive Help Codes
  • v2_notes_from_user_testing|Notes from user testing