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For descriptions of the GSEA windows and menu bar, use the following links.
These are the help pages displayed when you click a help button in the GSEA application.
Menu bar:
GSEA main window:
Load Data page: [1]
Run GSEA page: [2]
Select One or More Phenotypes: [_Select_One_or_More Phenotypes Windo]
Leading Edge Analysis page: [3]
Chip-to-Chip page: [4]
Browse MSigDB page: [5]
Analysis History page: [6]
GSEA Preranked page: [7]
Collapse Dataset page: [8]
Preferences window: [9]