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- mainpage|Documentation Home
- http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm%7CUser Guide
- quick_reference|Quick Reference
- gsea_tutorial|Tutorial
- data_formats|Data Formats
- Gsea_Algorithm|Algorithm
- http://wwwdev.broad.mit.edu/gsea/resources/datasets_index.html%7CPNAS 2005 Examples
- faq|Frequently Asked Questions
- gsea_papers|Papers that use GSEA
- license_info|Software License
- software_Acknowledgements|Software Acknowledgements
- MSigDB
- gene_set_card_guide|Guide to a GeneSetCard
- msigdb_dtd|Document Type Definition (DTD) for MSigDB
- mSigDB_License|MSigDB License
- mSigDB_Acknowledgements|MSigDB Acknowledgements
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- software_v2_release_notes|Software Version 2 Release Notes
- msigdb_may_2006_release_notes|MSigDB May 2006 Release Notes
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- gsea_wiki_notes|Wiki How-to-Use
- gsea_enhancements|Bugs and Enhancements
- context_sensitive_help_pages|Context Sensitive Help Codes
