MSigDB collections
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This page provides detailed descriptions of all collections of gene sets in MSigDB.
To learn about changes and other information specific for a particular release of MSigDB, please refer to the corresponding Release_Notes.
Contents
H: Hallmarks
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C1: positional gene sets
Genes from the same genomic location (chromosome or cytogenetic band) are grouped in a gene set. Cytogenetic annotations are from three sources:
- Human Genome Organization (HUGO) Gene Nomenclature Committee (HGNC)
- UniGene
- Affymetrix microarray annotations
C2: curated gene sets
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C3: motif gene sets
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C4:computational gene sets
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C5: GO gene sets
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C6: oncogenetic signatures
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C7: immunologic signatures
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