1010

The phenotype that you selected for the Phenotype labels parameter is a categorical phenotype. The metric that you selected in the Metric for ranking genes parameter is used with continuous phenotypes. Use one of the following metrics for categorical phenotypes:

• Signal2Noise (default)
• tTest
• Bhattacharyya

For more information about phenotypes, see Phenotype Labels in the GSEA User Guide. For descriptions of the metrics, see the Metric for ranking genes parameter on the Run GSEA Page in the GSEA User Guide.