Difference between revisions of "1010"
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| − | The phenotype that you selected for the <span style="font-style: italic;">Phenotype labels</span> parameter is a categorical phenotype. The metric that you selected in the <span style="font-style: italic;">Metric for ranking genes </span>parameter is used with continuous phenotypes. <br /><br />The following metrics can be used with categorical phenotypes:<br /><br />Signal2Noise (default)<br />tTest<br />Bhattacharyya<br /><br />For more information about phenotypes, see < | + | The phenotype that you selected for the <span style="font-style: italic;">Phenotype labels</span> parameter is a categorical phenotype. The metric that you selected in the <span style="font-style: italic;">Metric for ranking genes </span>parameter is used with continuous phenotypes. <br /><br />The following metrics can be used with categorical phenotypes:<br /><br />Signal2Noise (default)<br />tTest<br />Bhattacharyya<br /><br />For more information about phenotypes, see [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Phenotypes Phenotype Labels] in the <em style="">GSEA User Guide. </em>For descriptions of the metrics, see the <span style="font-style: italic;">Metric for ranking genes </span>parameter on the [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Run_GSEA_Page Run GSEA] help page. |
Revision as of 11:54, 4 April 2006
The phenotype that you selected for the Phenotype labels parameter is a categorical phenotype. The metric that you selected in the Metric for ranking genes parameter is used with continuous phenotypes.
The following metrics can be used with categorical phenotypes:
Signal2Noise (default)
tTest
Bhattacharyya
For more information about phenotypes, see Phenotype Labels in the GSEA User Guide. For descriptions of the metrics, see the Metric for ranking genes parameter on the Run GSEA help page.
