Difference between revisions of "GSEA v2.0.2 Release Notes"

From GeneSetEnrichmentAnalysisWiki
Jump to navigation Jump to search
 
 
(6 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
<a href="http://www.broad.mit.edu/gsea/">GSEA Home</a> | <a href="http://www.broad.mit.edu/gsea/downloads.jsp">Downloads</a> | <a href="http://www.broad.mit.edu/gsea/msigdb/">Molecular Signatures Database</a> | Documentation | <a href="http://www.broad.mit.edu/gsea/contact.jsp">Contact</a>  <br />
+
[http://www.broadinstitute.org/gsea/ GSEA Home] |
 +
[http://www.broadinstitute.org/gsea/downloads.jsp Downloads] |  
 +
[http://www.broadinstitute.org/gsea/msigdb/ Molecular Signatures Database] |
 +
[http://www.broadinstitute.org/cancer/software/gsea/wiki/index.php/Main_Page Documentation] |
 +
[http://www.broadinstitute.org/gsea/contact.jsp Contact] <br />
 
<br />
 
<br />
−
Release 2.0.2 supports password protection of the GSEA ftp site. This entailed no user-visible change to the GSEA application.<br />
+
Release 2.0.2 supports password protection of the GSEA ftp site. This entails no user-visible change to the GSEA application.<br />
 
<br />
 
<br />
−
Files can no longer be accessed directly from the GSEA ftp site. However, <br />
+
All chip annotation and MSigDB gene set files remain freely available from the [http://www.broad.mit.edu/gsea/downloads.jsp Downloads] page of the GSEA web site.<br />
 
<br />
 
<br />
−
Gene set and chip annotation files remain available from the <a href="http://www.broad.mit.edu/gsea/downloads.jsp">Downloads</a> page of the GSEA web site. Users who use the GSEA command line or other scripts to access files from the GSEA ftp site will now be prompted for a password. To avoid the prompt, download the required files from the GSEA web site and reference the downloaded files. Alternatively, contact GSEA team for the password.
+
<strong>Note: </strong>User-created scripts that access files from the GSEA ftp site (for example, batch jobs that execute the GSEA command line) will now prompt the user to enter the password for the ftp site. To avoid the prompt, download the required files from the [http://www.broad.mit.edu/gsea/downloads.jsp Downloads] page of the GSEA web site and have the scripts reference the downloaded files. Alternatively, contact the GSEA team for the ftp site password.

Latest revision as of 03:14, 25 September 2016

GSEA Home | Downloads | Molecular Signatures Database | Documentation | Contact

Release 2.0.2 supports password protection of the GSEA ftp site. This entails no user-visible change to the GSEA application.

All chip annotation and MSigDB gene set files remain freely available from the Downloads page of the GSEA web site.

Note: User-created scripts that access files from the GSEA ftp site (for example, batch jobs that execute the GSEA command line) will now prompt the user to enter the password for the ftp site. To avoid the prompt, download the required files from the Downloads page of the GSEA web site and have the scripts reference the downloaded files. Alternatively, contact the GSEA team for the ftp site password.

Retrieved from "https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=GSEA_v2.0.2_Release_Notes&oldid=4002"