MSigDB v6.1 Release Notes - Revision history https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=MSigDB_v6.1_Release_Notes&action=history Revision history for this page on the wiki en MediaWiki 1.34.4 Thu, 28 Mar 2024 13:28:40 GMT Helga at 16:58, 18 October 2017 https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=MSigDB_v6.1_Release_Notes&diff=4214&oldid=prev https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=MSigDB_v6.1_Release_Notes&diff=4214&oldid=prev <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 16:58, 18 October 2017</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l14" >Line 14:</td> <td colspan="2" class="diff-lineno">Line 14:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;/p&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;/p&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>&lt;h2&gt; <del class="diffchange diffchange-inline">Changes </del>to C3 - motif gene sets &lt;/h2&gt;</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>&lt;h2&gt; <ins class="diffchange diffchange-inline">Corrections </ins>to C3 - motif gene sets &lt;/h2&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;p&gt;In MSigDB 6.0 we updated the names of the motif gene sets. Unfortunately, there were errors in some of the name changes. This has now been fixed.  &lt;br&gt; The mapping between the corrected v6.1 names and erroneous v6.0 names can be found [[Mapping_between_v6.1_and_v6.0_gene_sets| here.]]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;p&gt;In MSigDB 6.0 we updated the names of the motif gene sets. Unfortunately, there were errors in some of the name changes. This has now been fixed.  &lt;br&gt; The mapping between the corrected v6.1 names and erroneous v6.0 names can be found [[Mapping_between_v6.1_and_v6.0_gene_sets| here.]]</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;/p&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;/p&gt;</div></td></tr> </table> Wed, 18 Oct 2017 16:58:35 GMT Helga https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php/Talk:MSigDB_v6.1_Release_Notes Helga at 16:58, 18 October 2017 https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=MSigDB_v6.1_Release_Notes&diff=4213&oldid=prev https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=MSigDB_v6.1_Release_Notes&diff=4213&oldid=prev <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 16:58, 18 October 2017</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l15" >Line 15:</td> <td colspan="2" class="diff-lineno">Line 15:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;h2&gt; Changes to C3 - motif gene sets &lt;/h2&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;h2&gt; Changes to C3 - motif gene sets &lt;/h2&gt;</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>&lt;p&gt;In MSigDB 6.0 we updated the names of the motif gene sets. Unfortunately, there were errors in some of the name changes. This has now been fixed.  The mapping between the corrected v6.1 names and erroneous v6.0 names can be found [[Mapping_between_v6.1_and_v6.0_gene_sets| here.]]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>&lt;p&gt;In MSigDB 6.0 we updated the names of the motif gene sets. Unfortunately, there were errors in some of the name changes. This has now been fixed.  <ins class="diffchange diffchange-inline">&lt;br&gt; </ins>The mapping between the corrected v6.1 names and erroneous v6.0 names can be found [[Mapping_between_v6.1_and_v6.0_gene_sets| here.]]</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;/p&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;/p&gt;</div></td></tr> </table> Wed, 18 Oct 2017 16:58:05 GMT Helga https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php/Talk:MSigDB_v6.1_Release_Notes Helga at 16:57, 18 October 2017 https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=MSigDB_v6.1_Release_Notes&diff=4212&oldid=prev https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=MSigDB_v6.1_Release_Notes&diff=4212&oldid=prev <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 16:57, 18 October 2017</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l15" >Line 15:</td> <td colspan="2" class="diff-lineno">Line 15:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;h2&gt; Changes to C3 - motif gene sets &lt;/h2&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;h2&gt; Changes to C3 - motif gene sets &lt;/h2&gt;</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>&lt;p&gt;In MSigDB 6.0 we updated the names of the motif gene sets. Unfortunately, there were errors in some of the name changes. This has now been fixed.</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>&lt;p&gt;In MSigDB 6.0 we updated the names of the motif gene sets. Unfortunately, there were errors in some of the name changes. This has now been fixed. <ins class="diffchange diffchange-inline"> The mapping between the corrected v6.1 names and erroneous v6.0 names can be found [[Mapping_between_v6.1_and_v6.0_gene_sets| here.]]</ins></div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;/p&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;/p&gt;</div></td></tr> </table> Wed, 18 Oct 2017 16:57:03 GMT Helga https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php/Talk:MSigDB_v6.1_Release_Notes Helga at 22:10, 13 October 2017 https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=MSigDB_v6.1_Release_Notes&diff=4207&oldid=prev https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=MSigDB_v6.1_Release_Notes&diff=4207&oldid=prev <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 22:10, 13 October 2017</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l10" >Line 10:</td> <td colspan="2" class="diff-lineno">Line 10:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;h2&gt;Updates to C2:CGP - curated gene sets&lt;/h2&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;h2&gt;Updates to C2:CGP - curated gene sets&lt;/h2&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;p&gt;We added 7 new gene sets from the literature:</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;p&gt;We added 7 new gene sets from the literature:</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>&lt;li&gt; 4 sets from [<del class="diffchange diffchange-inline">https</del>://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkw523 Fischer et al. (2016, Nucleic Acids Research)]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>&lt;li&gt; 4 sets from [<ins class="diffchange diffchange-inline">http</ins>://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkw523 Fischer et al. (2016, Nucleic Acids Research)]</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;li&gt; 3 sets from [http://cancerdiscovery.aacrjournals.org/content/7/8/884.long Grader et al. (2017, Cancer Discovery)]</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;li&gt; 3 sets from [http://cancerdiscovery.aacrjournals.org/content/7/8/884.long Grader et al. (2017, Cancer Discovery)]</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;/p&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;/p&gt;</div></td></tr> </table> Fri, 13 Oct 2017 22:10:42 GMT Helga https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php/Talk:MSigDB_v6.1_Release_Notes Helga at 22:07, 13 October 2017 https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=MSigDB_v6.1_Release_Notes&diff=4206&oldid=prev https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=MSigDB_v6.1_Release_Notes&diff=4206&oldid=prev <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 22:07, 13 October 2017</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l10" >Line 10:</td> <td colspan="2" class="diff-lineno">Line 10:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;h2&gt;Updates to C2:CGP - curated gene sets&lt;/h2&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;h2&gt;Updates to C2:CGP - curated gene sets&lt;/h2&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;p&gt;We added 7 new gene sets from the literature:</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;p&gt;We added 7 new gene sets from the literature:</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>&lt;li&gt; 4 sets from Fischer et al. (2016, Nucleic Acids Research)</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>&lt;li&gt; 4 sets from <ins class="diffchange diffchange-inline">[https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkw523 </ins>Fischer et al. (2016, Nucleic Acids Research)<ins class="diffchange diffchange-inline">]</ins></div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>&lt;li&gt; 3 sets from Grader et al. (2017, Cancer Discovery)<del class="diffchange diffchange-inline">.</del></div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>&lt;li&gt; 3 sets from <ins class="diffchange diffchange-inline">[http://cancerdiscovery.aacrjournals.org/content/7/8/884.long </ins>Grader et al. (2017, Cancer Discovery)<ins class="diffchange diffchange-inline">]</ins></div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;/p&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;/p&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"></td></tr> </table> Fri, 13 Oct 2017 22:07:27 GMT Helga https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php/Talk:MSigDB_v6.1_Release_Notes Helga: Created page with '<span class="plainlinks"> [http://www.broadinstitute.org/gsea/ GSEA Home] | [http://www.broadinstitute.org/gsea/downloads.jsp Downloads] | [http://www.broadinstitute.org/gsea/ms…' https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=MSigDB_v6.1_Release_Notes&diff=4204&oldid=prev https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=MSigDB_v6.1_Release_Notes&diff=4204&oldid=prev <p>Created page with &#039;&lt;span class=&quot;plainlinks&quot;&gt; [http://www.broadinstitute.org/gsea/ GSEA Home] | [http://www.broadinstitute.org/gsea/downloads.jsp Downloads] | [http://www.broadinstitute.org/gsea/ms…&#039;</p> <p><b>New page</b></p><div>&lt;span class=&quot;plainlinks&quot;&gt;<br /> [http://www.broadinstitute.org/gsea/ GSEA Home] |<br /> [http://www.broadinstitute.org/gsea/downloads.jsp Downloads] | <br /> [http://www.broadinstitute.org/gsea/msigdb/ Molecular Signatures Database] | <br /> [http://www.broadinstitute.org/cancer/software/gsea/wiki/index.php/Main_Page Documentation] |<br /> [http://www.broadinstitute.org/gsea/contact.jsp Contact]<br /> &lt;/span&gt;<br /> &lt;p&gt;This page describes the changes made to the gene set collections for Release 6.1 of the Molecular Signatures Database (MSigDB).&lt;/p&gt;<br /> <br /> &lt;h2&gt;Updates to C2:CGP - curated gene sets&lt;/h2&gt;<br /> &lt;p&gt;We added 7 new gene sets from the literature:<br /> &lt;li&gt; 4 sets from Fischer et al. (2016, Nucleic Acids Research)<br /> &lt;li&gt; 3 sets from Grader et al. (2017, Cancer Discovery).<br /> &lt;/p&gt;<br /> <br /> &lt;h2&gt; Changes to C3 - motif gene sets &lt;/h2&gt;<br /> &lt;p&gt;In MSigDB 6.0 we updated the names of the motif gene sets. Unfortunately, there were errors in some of the name changes. This has now been fixed.<br /> &lt;/p&gt;</div> Fri, 13 Oct 2017 22:01:31 GMT Helga https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php/Talk:MSigDB_v6.1_Release_Notes