Mapping between v3.1 and v3.0 gene sets

This page only includes gene sets from v3.0 with direct counterparts in v3.1, or sets that became deprecated in v3.1.

C2 collection

<tbody> </tbody>

v3.0 (old)	v3.1 (new)
HOLLMAN_APOPTOSIS_VIA_CD40_UP	HOLLMANN_APOPTOSIS_VIA_CD40_UP
HOLLMAN_APOPTOSIS_VIA_CD40_DN	HOLLMANN_APOPTOSIS_VIA_CD40_DN
FARMER_BREAST_CANCER_APOCRINE VS LUMINAL	FARMER_BREAST_CANCER_APOCRINE_VS_LUMINAL
SCHWAB_TARGETS_OF_BMYB_S427G_UP	SCHWAB_TARGETS_OF_BMYB_POLYMORPHIC_VARIANTS_UP
SCHWAB_TARGETS_OF_BMYB_S427G_DN	SCHWAB_TARGETS_OF_BMYB_POLYMORPHIC_VARIANTS_DN
IIZUKA_RECURRENT_LIVER_CANCER	IIZUKA_LIVER_CANCER_EARLY_RECURRENCE
WELCSH_BRCA1_TARGETS_1_UP	WELCSH_BRCA1_TARGETS_UP
WELCSH_BRCA1_TARGETS_1_DN	WELCSH_BRCA1_TARGETS_DN
FOSTER_INFLAMMATORY_RESPONSE_LPS_UP	FOSTER_TOLERANT_MACROPHAGE_UP
FOSTER_INFLAMMATORY_RESPONSE_LPS_DN	FOSTER_TOLERANT_MACROPHAGE_DN
KAPOSI_LIVER_CANCER_POOR_SURVIVAL_UP	KAPOSI_LIVER_CANCER_MET_UP
KAPOSI_LIVER_CANCER_POOR_SURVIVAL_DN	KAPOSI_LIVER_CANCER_MET_DN
KORKOLA_TERATOMA_DN	deprecated: over 90% identity to another set
KORKOLA_YOLK_SAC_TUMOR_DN	deprecated: over 90% identity to another set
ZHOU_INFLAMMATORY_RESPONSE_LPS_DN	deprecated: over 90% identity to another set
NAKAMURA_LUNG_CANCER_MARKERS	deprecated: over 90% identity to another set
FARMER_BREAST_CANCER_CLUSTER_3	deprecated: over 90% identity to another set
FINETTI_BREAST_CANCER_BASAL_VS_LUMINAL	deprecated: over 90% identity to another set
GRESHOCK_CANCER_COPY_NUMBER_DN	deprecated: over 90% identity to another set
RUNNE_GENDER_EFFECT_DN	deprecated: size < 5 after mapping to human Entrez Gene IDs
TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_SUSTAINDED_IN_ERYTHROCYTE_DN	deprecated: size < 5 after mapping to human Entrez Gene IDs
MUELLER_X_LINKED_COPY_NUMBER_UP	deprecated: size < 5 after mapping to human Entrez Gene IDs
MUELLER_X_LINKED_COPY_NUMBER_DN	deprecated: size < 5 after mapping to human Entrez Gene IDs
VICENT_METASTASIS_DN	deprecated: size < 5 after mapping to human Entrez Gene IDs
ACEVEDO_METHYLATED_IN_LIVER_CANCER_UP	deprecated: size > 2,000 after mapping to human Entrez Gene IDs
BOYAULT_LIVER_CANCER_SUBCLASS_G5_UP	deprecated: size < 5 after mapping to human Entrez Gene IDs
GUTIERREZ_MULTIPLE_MYELOMA_UP	deprecated: size < 5 after mapping to human Entrez Gene IDs
GOVONI_GH1_TARGETS_24HR_DN	deprecated: size < 5 after mapping to human Entrez Gene IDs
RUGO_ENVIRONMENTAL_STRESS_RESPONSE_UP	deprecated: the set has incorrect PMID and contains original members from another set
RUGO_RESPONSE_TO_4NQO	deprecated: the set has incorrect PMID and contains original members from another set
RUGO_RESPONSE_TO_GAMMA_RADIATION	deprecated: the set has incorrect PMID and contains original members from another set
RUGO_STRESS_RESPONSE_SUBSET_F	deprecated: the set has incorrect PMID and contains original members from another set
RUGO_STRESS_RESPONSE_SUBSET_G	deprecated: the set has incorrect PMID and contains original members from another set
RUGO_STRESS_RESPONSE_SUBSET_H	deprecated: the set has incorrect PMID and contains original members from another set
RUGO_UV_RESPONSE	deprecated: the set has incorrect PMID and contains original members from another set
RUGO_RESPONSE_TO_4NQO	deprecated: the set has incorrect PMID and contains original members from another set