Difference between revisions of "Mapping between v5.0 and v4.0 gene sets"

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<h2>C2 collection</h2>
 
<h2>C2 collection</h2>
 
<table width=600 cellspacing="4" cellpadding="4" border="3" align="" summary="" style="border-collapse: collapse;">
 
<table width=600 cellspacing="4" cellpadding="4" border="3" align="" summary="" style="border-collapse: collapse;">
−
<tbody>
 
 
<tr><td><strong>v4.0 (old) </strong></td><td><strong>v5.0 (new)</strong></td><td>notes</td></tr>
 
<tr><td><strong>v4.0 (old) </strong></td><td><strong>v5.0 (new)</strong></td><td>notes</td></tr>
−
<tr><td>PECE_MAMMARY_STEM_CELL_UP</td><td>PECE_MAMMARY_STEM_CELL_UP</td><td>changed members</td></tr>
+
<tr>
−
<tr><td>PECE_MAMMARY_STEM_CELL_DN</td><td>PECE_MAMMARY_STEM_CELL_DN</td><td>changed members</td></tr>
+
<td>PECE_MAMMARY_STEM_CELL_UP</td>
−
</tbody>
+
<td>PECE_MAMMARY_STEM_CELL_UP</td>
 +
<td>changed members</td>
 +
</tr>
 +
<tr>
 +
<td>PECE_MAMMARY_STEM_CELL_DN</td>
 +
<td>PECE_MAMMARY_STEM_CELL_DN</td>
 +
<td>changed members</td>
 +
</tr>
 +
<tr>
 +
<td>KOINUMA_COLON_CANCER_MSI_UP</td>
 +
<td>KOINUMA_COLON_CANCER_MSI_UP</td>
 +
<td>changed members</td>
 +
</tr>
 +
<tr>
 +
<td> VERHAAK_GLIOBLASTOMA_PRONEURAL</td>
 +
<td> VERHAAK_GLIOBLASTOMA_PRONEURAL</td>
 +
<td>changed members</td>
 +
</tr>
 +
<tr>
 +
<td> VERHAAK_GLIOBLASTOMA_NEURAL</td>
 +
<td> VERHAAK_GLIOBLASTOMA_NEURAL</td>
 +
<td>changed members</td>
 +
</tr>
 +
<tr>
 +
<td> VERHAAK_GLIOBLASTOMA_CLASSICAL</td>
 +
<td> VERHAAK_GLIOBLASTOMA_CLASSICAL</td>
 +
<td>changed members</td>
 +
</tr>
 +
<tr>
 +
<td> VERHAAK_GLIOBLASTOMA_MESENCHYMAL</td>
 +
<td> VERHAAK_GLIOBLASTOMA_MESENCHYMAL</td>
 +
<td>changed members</td>
 +
</tr>
 +
<tr>
 +
<td>HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_UP</td>
 +
<td>HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_UP</td>
 +
<td>changed members</td>
 +
</tr>
 +
<tr>
 +
<td>HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_DN</td>
 +
<td>HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_DN</td>
 +
<td>changed members</td>
 +
</tr>
 +
<tr>
 +
<td>AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_UP</td>
 +
<td>AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_UP</td>
 +
<td>changed members</td>
 +
</tr>
 +
<tr>
 +
<td>AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_DN</td>
 +
<td>AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_DN</td>
 +
<td>changed members</td>
 +
</tr>
 +
<tr>
 +
<td>DURAND_STROMA_MAX_DN</td>
 +
<td>DURAND_STROMA_S_UP</td>
 +
<td>changed members, brief description and name</td>
 +
</tr>
 +
<tr>
 +
<td>DURAND_STROMA_NS_UP</td>
 +
<td>DURAND_STROMA_NS_UP</td>
 +
<td>changed members, brief description and name</td>
 +
</tr>
 +
<tr>
 +
<td>POTTI_5FU_SENSITIVITY </td>
 +
<td>-</td>
 +
<td>deprecated</td>
 +
</tr>
 +
<tr>
 +
<td>POTTI_ADRIAMYCIN_SENSITIVITY </td>
 +
<td>-</td>
 +
<td>deprecated</td>
 +
</tr>
 +
<tr>
 +
<td>POTTI_CYTOXAN_SENSITIVITY </td>
 +
<td>-</td>
 +
<td>deprecated</td>
 +
</tr>
 +
<tr>
 +
<td>POTTI_DOCETAXEL_SENSITIVITY </td>
 +
<td>-</td>
 +
<td>deprecated</td>
 +
</tr>
 +
<tr>
 +
<td>POTTI_ETOPOSIDE_SENSITIVITY </td>
 +
<td>-</td>
 +
<td>deprecated</td>
 +
</tr>
 +
<tr>
 +
<td>POTTI_PACLITAXEL_SENSITIVITY </td>
 +
<td>-</td>
 +
<td>deprecated</td>
 +
</tr>
 +
<tr>
 +
<td>POTTI_TOPOTECAN_SENSITIVITY </td>
 +
<td>-</td>
 +
<td>deprecated</td>
 +
</tr>
 
</table>
 
</table>

Latest revision as of 12:06, 6 October 2016

This page only includes gene sets from v4.0 with direct counterparts in v5.0, or sets that became deprecated in v5.0.

C2 collection

v4.0 (old) v5.0 (new)notes
PECE_MAMMARY_STEM_CELL_UP PECE_MAMMARY_STEM_CELL_UP changed members
PECE_MAMMARY_STEM_CELL_DN PECE_MAMMARY_STEM_CELL_DN changed members
KOINUMA_COLON_CANCER_MSI_UP KOINUMA_COLON_CANCER_MSI_UP changed members
VERHAAK_GLIOBLASTOMA_PRONEURAL VERHAAK_GLIOBLASTOMA_PRONEURAL changed members
VERHAAK_GLIOBLASTOMA_NEURAL VERHAAK_GLIOBLASTOMA_NEURAL changed members
VERHAAK_GLIOBLASTOMA_CLASSICAL VERHAAK_GLIOBLASTOMA_CLASSICAL changed members
VERHAAK_GLIOBLASTOMA_MESENCHYMAL VERHAAK_GLIOBLASTOMA_MESENCHYMAL changed members
HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_UP HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_UP changed members
HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_DN HOLLEMAN_PREDNISOLONE_RESISTANCE_ALL_DN changed members
AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_UP AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_UP changed members
AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_DN AZARE_NEOPLASTIC_TRANSFORMATION_BY_STAT3_DN changed members
DURAND_STROMA_MAX_DN DURAND_STROMA_S_UP changed members, brief description and name
DURAND_STROMA_NS_UP DURAND_STROMA_NS_UP changed members, brief description and name
POTTI_5FU_SENSITIVITY - deprecated
POTTI_ADRIAMYCIN_SENSITIVITY - deprecated
POTTI_CYTOXAN_SENSITIVITY - deprecated
POTTI_DOCETAXEL_SENSITIVITY - deprecated
POTTI_ETOPOSIDE_SENSITIVITY - deprecated
POTTI_PACLITAXEL_SENSITIVITY - deprecated
POTTI_TOPOTECAN_SENSITIVITY - deprecated
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