https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=Quick_reference&feed=atom&action=history Quick reference - Revision history 2024-03-28T23:18:32Z Revision history for this page on the wiki MediaWiki 1.34.4 https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=Quick_reference&diff=2555&oldid=prev Hkuehn at 17:38, 12 January 2007 2007-01-12T17:38:42Z <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 17:38, 12 January 2007</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l4" >Line 4:</td> <td colspan="2" class="diff-lineno">Line 4:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>SERVER: {{SERVER}}&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>SERVER: {{SERVER}}&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">localurl: {{localurl}}&lt;br /&gt;</del></div></td><td colspan="2"> </td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">fullurl: {{fullurl}}&lt;br /&gt;</del></div></td><td colspan="2"> </td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>UG variable: [{{SERVER}}/gsea/doc/GSEAUserGuideFrame.html UG]&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>UG variable: [{{SERVER}}/gsea/doc/GSEAUserGuideFrame.html UG]&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>MSigDB variable: [{{SERVER}}/gsea/msigdb/msigdb_index.html MSigDB]&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>MSigDB variable: [{{SERVER}}/gsea/msigdb/msigdb_index.html MSigDB]&lt;br /&gt;</div></td></tr> </table> Hkuehn https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=Quick_reference&diff=2554&oldid=prev Hkuehn at 17:37, 12 January 2007 2007-01-12T17:37:50Z <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 17:37, 12 January 2007</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l3" >Line 3:</td> <td colspan="2" class="diff-lineno">Line 3:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">SERVER: {{SERVER}}&lt;br /&gt;</ins></div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">localurl: {{localurl}}&lt;br /&gt;</ins></div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">fullurl: {{fullurl}}&lt;br /&gt;</ins></div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>UG variable: [{{SERVER}}/gsea/doc/GSEAUserGuideFrame.html UG]&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>UG variable: [{{SERVER}}/gsea/doc/GSEAUserGuideFrame.html UG]&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>MSigDB variable: [{{SERVER}}/gsea/msigdb/msigdb_index.html MSigDB]&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>MSigDB variable: [{{SERVER}}/gsea/msigdb/msigdb_index.html MSigDB]&lt;br /&gt;</div></td></tr> </table> Hkuehn https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=Quick_reference&diff=2553&oldid=prev Hkuehn at 17:33, 12 January 2007 2007-01-12T17:33:45Z <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 17:33, 12 January 2007</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l3" >Line 3:</td> <td colspan="2" class="diff-lineno">Line 3:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">Server: {{SERVER}}&lt;br /&gt;</del></div></td><td colspan="2"> </td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div><del style="font-weight: bold; text-decoration: none;">UG static dev: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuideFrame.html UG]&lt;br /&gt;</del></div></td><td colspan="2"> </td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>UG variable: [{{SERVER}}/gsea/doc/GSEAUserGuideFrame.html UG]&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>UG variable: [{{SERVER}}/gsea/doc/GSEAUserGuideFrame.html UG]&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">MSigDB variable: [{{SERVER}}/gsea/msigdb/msigdb_index.html MSigDB]&lt;br /&gt;</ins></div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Menu bar: [[../../../doc/GSEAUserGuideFrame.html|User Guide]]&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Menu bar: [[../../../doc/GSEAUserGuideFrame.html|User Guide]]&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>GSEA main window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>GSEA main window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]&lt;br /&gt;</div></td></tr> </table> Hkuehn https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=Quick_reference&diff=2552&oldid=prev Hkuehn at 17:32, 12 January 2007 2007-01-12T17:32:18Z <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 17:32, 12 January 2007</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l4" >Line 4:</td> <td colspan="2" class="diff-lineno">Line 4:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Server: {{SERVER}}&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Server: {{SERVER}}&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">UG static dev: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuideFrame.html UG]&lt;br /&gt;</ins></div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">UG variable: [{{SERVER}}/gsea/doc/GSEAUserGuideFrame.html UG]&lt;br /&gt;</ins></div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Menu bar: [[../../../doc/GSEAUserGuideFrame.html|User Guide]]&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Menu bar: [[../../../doc/GSEAUserGuideFrame.html|User Guide]]&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>GSEA main window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>GSEA main window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]&lt;br /&gt;</div></td></tr> </table> Hkuehn https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=Quick_reference&diff=2551&oldid=prev Hkuehn at 17:29, 12 January 2007 2007-01-12T17:29:18Z <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 17:29, 12 January 2007</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l3" >Line 3:</td> <td colspan="2" class="diff-lineno">Line 3:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">Server: {{SERVER}}&lt;br /&gt;</ins></div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Menu bar: [[../../../doc/GSEAUserGuideFrame.html|User Guide]]&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Menu bar: [[../../../doc/GSEAUserGuideFrame.html|User Guide]]&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>GSEA main window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>GSEA main window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]&lt;br /&gt;</div></td></tr> </table> Hkuehn https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=Quick_reference&diff=2550&oldid=prev Hkuehn at 17:10, 12 January 2007 2007-01-12T17:10:33Z <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 17:10, 12 January 2007</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l3" >Line 3:</td> <td colspan="2" class="diff-lineno">Line 3:</td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>Menu bar: [../../../doc/GSEAUserGuideFrame.html User Guide]&lt;br /&gt;</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Menu bar: <ins class="diffchange diffchange-inline">[</ins>[../../../doc/GSEAUserGuideFrame.html<ins class="diffchange diffchange-inline">|</ins>User Guide<ins class="diffchange diffchange-inline">]</ins>]&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>GSEA main window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>GSEA main window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]&lt;br /&gt;</div></td></tr> <tr><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Load Data page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Load_Data_Page]&lt;br /&gt;</div></td><td class='diff-marker'> </td><td style="background-color: #f8f9fa; color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Load Data page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Load_Data_Page]&lt;br /&gt;</div></td></tr> </table> Hkuehn https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=Quick_reference&diff=2549&oldid=prev Hkuehn at 17:10, 12 January 2007 2007-01-12T17:10:15Z <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 17:10, 12 January 2007</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1" >Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;For descriptions of the GSEA windows and menu bar, use the following links. &lt;br /&gt;These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;&lt;br /&gt;Menu bar: [<del class="diffchange diffchange-inline">http:</del>//<del class="diffchange diffchange-inline">wwwdev.broad</del>.<del class="diffchange diffchange-inline">mit</del>.<del class="diffchange diffchange-inline">edu/gsea</del>/doc/<del class="diffchange diffchange-inline">GSEAUserGuide</del>.<del class="diffchange diffchange-inline">htm#Menu_Bar</del>]&lt;br /&gt;GSEA main window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]&lt;br /&gt;Load Data page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Load_Data_Page]&lt;br /&gt;Run GSEA page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Run_GSEA_Page]&lt;br /&gt;&amp;nbsp;&amp;nbsp;&amp;nbsp; Select One or More Phenotypes: &lt;br /&gt;[http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Select_One_or_More_Phenotypes_Windo]&lt;br /&gt;Leading Edge Analysis page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Leading_Edge_Analysis_Page]&lt;br /&gt;Chip-to-Chip page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Chip2Chip_Page]&lt;br /&gt;Browse MSigDB page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Browse_MSigDB_Page]&lt;br /&gt;Analysis History page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Analysis_History_Page]&lt;br /&gt;GSEA Preranked page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Preranked_Page]&lt;br /&gt;Collapse Dataset page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Collapse_Dataset_Page]&lt;br /&gt;Preferences window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Preferences_Window]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>For descriptions of the GSEA windows and menu bar, use the following links. &lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Menu bar: [<ins class="diffchange diffchange-inline">..</ins>/<ins class="diffchange diffchange-inline">..</ins>/../doc/<ins class="diffchange diffchange-inline">GSEAUserGuideFrame</ins>.<ins class="diffchange diffchange-inline">html User Guide</ins>]&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>GSEA main window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Load Data page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Load_Data_Page]&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Run GSEA page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Run_GSEA_Page]&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>&amp;nbsp;&amp;nbsp;&amp;nbsp; Select One or More Phenotypes: &lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>[http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Select_One_or_More_Phenotypes_Windo]&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Leading Edge Analysis page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Leading_Edge_Analysis_Page]&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Chip-to-Chip page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Chip2Chip_Page]&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Browse MSigDB page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Browse_MSigDB_Page]&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Analysis History page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Analysis_History_Page]&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>GSEA Preranked page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Preranked_Page]&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Collapse Dataset page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Collapse_Dataset_Page]&lt;br /&gt;</div></td></tr> <tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>Preferences window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Preferences_Window]</div></td></tr> </table> Hkuehn https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=Quick_reference&diff=1610&oldid=prev Hkuehn at 18:31, 31 March 2006 2006-03-31T18:31:24Z <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 18:31, 31 March 2006</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1" >Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;For descriptions of the GSEA windows and menu bar, use the following links. &lt;br /&gt;These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;&lt;br /&gt;Menu bar: &lt;br /&gt;GSEA main window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]&lt;br /&gt;Load Data page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Load_Data_Page]&lt;br /&gt;Run GSEA page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Run_GSEA_Page]&lt;br /&gt;&amp;nbsp;&amp;nbsp;&amp;nbsp; Select One or More Phenotypes: &lt;br /&gt;[http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Select_One_or_More_Phenotypes_Windo]&lt;br /&gt;Leading Edge Analysis page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Leading_Edge_Analysis_Page]&lt;br /&gt;Chip-to-Chip page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Chip2Chip_Page]&lt;br /&gt;Browse MSigDB page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Browse_MSigDB_Page]&lt;br /&gt;Analysis History page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Analysis_History_Page]&lt;br /&gt;GSEA Preranked page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Preranked_Page]&lt;br /&gt;Collapse Dataset page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Collapse_Dataset_Page]&lt;br /&gt;Preferences window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Preferences_Window]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;For descriptions of the GSEA windows and menu bar, use the following links. &lt;br /&gt;These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;&lt;br /&gt;Menu bar: <ins class="diffchange diffchange-inline">[http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Menu_Bar]</ins>&lt;br /&gt;GSEA main window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]&lt;br /&gt;Load Data page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Load_Data_Page]&lt;br /&gt;Run GSEA page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Run_GSEA_Page]&lt;br /&gt;&amp;nbsp;&amp;nbsp;&amp;nbsp; Select One or More Phenotypes: &lt;br /&gt;[http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Select_One_or_More_Phenotypes_Windo]&lt;br /&gt;Leading Edge Analysis page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Leading_Edge_Analysis_Page]&lt;br /&gt;Chip-to-Chip page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Chip2Chip_Page]&lt;br /&gt;Browse MSigDB page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Browse_MSigDB_Page]&lt;br /&gt;Analysis History page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Analysis_History_Page]&lt;br /&gt;GSEA Preranked page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Preranked_Page]&lt;br /&gt;Collapse Dataset page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Collapse_Dataset_Page]&lt;br /&gt;Preferences window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Preferences_Window]</div></td></tr> </table> Hkuehn https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=Quick_reference&diff=1609&oldid=prev Hkuehn at 18:29, 31 March 2006 2006-03-31T18:29:24Z <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 18:29, 31 March 2006</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1" >Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;For descriptions of the GSEA windows and menu bar, use the following links. &lt;br /&gt;These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;&lt;br /&gt;Menu bar: &lt;br /&gt;GSEA main window: &lt;br /&gt;Load Data page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Load_Data_Page]&lt;br /&gt;Run GSEA page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Run_GSEA_Page]&lt;br /&gt;&amp;nbsp;&amp;nbsp;&amp;nbsp; Select One or More Phenotypes: &lt;br /&gt;[http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Select_One_or_More_Phenotypes_Windo]&lt;br /&gt;Leading Edge Analysis page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Leading_Edge_Analysis_Page]&lt;br /&gt;Chip-to-Chip page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Chip2Chip_Page]&lt;br /&gt;Browse MSigDB page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Browse_MSigDB_Page]&lt;br /&gt;Analysis History page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Analysis_History_Page]&lt;br /&gt;GSEA Preranked page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Preranked_Page]&lt;br /&gt;Collapse Dataset page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Collapse_Dataset_Page]&lt;br /&gt;Preferences window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Preferences_Window]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;For descriptions of the GSEA windows and menu bar, use the following links. &lt;br /&gt;These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;&lt;br /&gt;Menu bar: &lt;br /&gt;GSEA main window: <ins class="diffchange diffchange-inline">[http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Main_Window]</ins>&lt;br /&gt;Load Data page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Load_Data_Page]&lt;br /&gt;Run GSEA page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Run_GSEA_Page]&lt;br /&gt;&amp;nbsp;&amp;nbsp;&amp;nbsp; Select One or More Phenotypes: &lt;br /&gt;[http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Select_One_or_More_Phenotypes_Windo]&lt;br /&gt;Leading Edge Analysis page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Leading_Edge_Analysis_Page]&lt;br /&gt;Chip-to-Chip page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Chip2Chip_Page]&lt;br /&gt;Browse MSigDB page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Browse_MSigDB_Page]&lt;br /&gt;Analysis History page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Analysis_History_Page]&lt;br /&gt;GSEA Preranked page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#GSEA_Preranked_Page]&lt;br /&gt;Collapse Dataset page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Collapse_Dataset_Page]&lt;br /&gt;Preferences window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Preferences_Window]</div></td></tr> </table> Hkuehn https://software.broadinstitute.org/cancer/software/gsea/wiki/index.php?title=Quick_reference&diff=1608&oldid=prev Hkuehn at 18:28, 31 March 2006 2006-03-31T18:28:48Z <p></p> <table class="diff diff-contentalign-left" data-mw="interface"> <col class="diff-marker" /> <col class="diff-content" /> <col class="diff-marker" /> <col class="diff-content" /> <tr class="diff-title" lang="en"> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">← Older revision</td> <td colspan="2" style="background-color: #fff; color: #222; text-align: center;">Revision as of 18:28, 31 March 2006</td> </tr><tr><td colspan="2" class="diff-lineno" id="mw-diff-left-l1" >Line 1:</td> <td colspan="2" class="diff-lineno">Line 1:</td></tr> <tr><td class='diff-marker'>−</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;For descriptions of the GSEA windows and menu bar, use the following links. &lt;br /&gt;These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;&lt;br /&gt;Menu bar: &lt;br /&gt;GSEA main window: &lt;br /&gt;Load Data page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Load_Data_Page]&lt;br /&gt;Run GSEA page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Run_GSEA_Page]&lt;br /&gt;&amp;nbsp;&amp;nbsp;&amp;nbsp; Select One or More Phenotypes: &lt;br /&gt;[http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Select_One_or_More_Phenotypes_Windo]&lt;br /&gt;Leading Edge Analysis page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Leading_Edge_Analysis_Page]&lt;br /&gt;Chip-to-Chip page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Chip2Chip_Page]&lt;br /&gt;Browse MSigDB page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#<del class="diffchange diffchange-inline">Browse_MsigDB_Page</del>]&lt;br /&gt;Analysis History page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Analysis_History_Page]&lt;br /&gt;GSEA Preranked page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#<del class="diffchange diffchange-inline">GSEAPreranked_Page</del>]&lt;br /&gt;Collapse Dataset page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#<del class="diffchange diffchange-inline">CollapseDataset_Page</del>]&lt;br /&gt;Preferences window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Preferences_Window]</div></td><td class='diff-marker'>+</td><td style="color: #222; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div>&lt;br /&gt;For descriptions of the GSEA windows and menu bar, use the following links. &lt;br /&gt;These are the help pages displayed when you click a help button in the GSEA application.&lt;br /&gt;&lt;br /&gt;Menu bar: &lt;br /&gt;GSEA main window: &lt;br /&gt;Load Data page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Load_Data_Page]&lt;br /&gt;Run GSEA page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Run_GSEA_Page]&lt;br /&gt;&amp;nbsp;&amp;nbsp;&amp;nbsp; Select One or More Phenotypes: &lt;br /&gt;[http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Select_One_or_More_Phenotypes_Windo]&lt;br /&gt;Leading Edge Analysis page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Leading_Edge_Analysis_Page]&lt;br /&gt;Chip-to-Chip page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Chip2Chip_Page]&lt;br /&gt;Browse MSigDB page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#<ins class="diffchange diffchange-inline">Browse_MSigDB_Page</ins>]&lt;br /&gt;Analysis History page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Analysis_History_Page]&lt;br /&gt;GSEA Preranked page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#<ins class="diffchange diffchange-inline">GSEA_Preranked_Page</ins>]&lt;br /&gt;Collapse Dataset page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#<ins class="diffchange diffchange-inline">Collapse_Dataset_Page</ins>]&lt;br /&gt;Preferences window: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Preferences_Window]</div></td></tr> </table> Hkuehn