Difference between revisions of "Software Acknowledgements"
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| − | <td> | + | <td><a href="http://www.jidesoft.com jidesoft.com">Jide Software</a></td> |
| − | <a href="http://www.jidesoft.com jidesoft.com">Jide Software</a></td> | ||
<td>Java/Swing components</td> | <td>Java/Swing components</td> | ||
| + | <td></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
| − | <td> | + | <td><a href="http://www.oracle.com/technetwork/java/index.html http://www.oracle.com/technetwork/java/index.html">The Java 2 Platform</td> |
| − | <a href="http://www.oracle.com/technetwork/java/index.html http://www.oracle.com/technetwork/java/index.html">The Java 2 Platform | ||
| − | |||
<td>Language that the GSEA desktop application is written in</td> | <td>Language that the GSEA desktop application is written in</td> | ||
| + | <td>[[image:duke.gif]]</td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
| − | <td> | + | <td><a href="http://www.r-project.org/index.html www.r-project.org">The R programming language</a></td> |
| − | <a href="http://www.r-project.org/index.html www.r-project.org">The R programming language</a> | ||
| − | |||
<td>Language that the GSEAP-P-R is written in</td> | <td>Language that the GSEAP-P-R is written in</td> | ||
| + | <td>[[image:Rlogo.jpg]]</td> | ||
</tr> | </tr> | ||
| − | <tr | + | <tr> |
| − | <td>Intellij IDEA<br>[[image:idea.png]]</td> | + | <td><a href="http://www.intellij.com/idea/">Intellij IDEA</a><br> |
| + | [[image:idea.png]]</td> | ||
<td>An awesome integrated development environment for Java</td> | <td>An awesome integrated development environment for Java</td> | ||
| − | + | </tr> | |
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<tr> | <tr> | ||
| − | <td>JGoodies</td> | + | <td><a href="http://www.jgoodies.com/ www.jgoodies.com">JGoodies</a></td> |
<td>Forms layout and java look and feel</td> | <td>Forms layout and java look and feel</td> | ||
| − | <td> | + | </tr> |
| + | <tr> | ||
| + | <td><a href="http://foxtrot.sourceforge.net/docs/introduction.php">foxtrot</a></td> | ||
| + | <td>Java event handling mechanism for GUI's.</td> | ||
</tr> | </tr> | ||
| − | <tr | + | <tr> |
| − | + | <td><a href="http://www.dom4j.org/">dom4j</a></td> | |
| − | + | <td>XML Parser</td> | |
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<tr style="height: 64.5pt;"> | <tr style="height: 64.5pt;"> | ||
Revision as of 15:14, 16 October 2012
<a href="http://www.broadinstitute.org/gsea/">GSEA Home</a> |
<a href="http://www.broadinstitute.org/gsea/downloads.jsp">Downloads</a> |
<a href="http://www.broadinstitute.org/gsea/msigdb/">Molecular Signatures Database</a> |
<a href="http://www.broadinstitute.org/cancer/software/gsea/wiki/index.php/Main_Page">Documentation</a> |
<a href="http://www.broadinstitute.org/gsea/contact.jsp">Contact</a>
GSEA implementations use many software tools and libraries, several of which are open source or freely available. Our thanks to their developers.
<tbody> </tbody>| <a href="http://www.jidesoft.com jidesoft.com">Jide Software</a> | Java/Swing components | |
| <a href="http://www.oracle.com/technetwork/java/index.html http://www.oracle.com/technetwork/java/index.html">The Java 2 Platform | Language that the GSEA desktop application is written in |  |
| <a href="http://www.r-project.org/index.html www.r-project.org">The R programming language</a> | Language that the GSEAP-P-R is written in |  |
<a href="http://www.intellij.com/idea/">Intellij IDEA</a> |
An awesome integrated development environment for Java | |
| <a href="http://www.jgoodies.com/ www.jgoodies.com">JGoodies</a> | Forms layout and java look and feel | |
| <a href="http://foxtrot.sourceforge.net/docs/introduction.php">foxtrot</a> | Java event handling mechanism for GUI's. | |
| <a href="http://www.dom4j.org/">dom4j</a> | XML Parser | |
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itext
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Java PDF library |
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Jakarta POI (especially HSSF)
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Java excel reporting |
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JFreeChart
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Graphing library for Java |
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JUnit
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Unit testing API |
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log4j
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Logging toolkit for Java |
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Oro |
Regular expressions library in Java |
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Trove |
High performance collections library from GNU |
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ECS |
Element construction set (a HTML tag library from Apache <st1:place w:st="on"><st1:city w:st="on">Jakarta</st1:city></st1:place>) |
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Xenu link sleuth |
Website broken link checker |
