Software Acknowledgements

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[http://www.broadinstitute.org/gsea/contact.jsp Contact]
[http://www.broadinstitute.org/gsea/contact.jsp Contact]
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<p>GSEA implementations use many software tools and libraries, several of which are open source or freely available. Our thanks to their developers.</p>
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The GSEA Desktop v3.0 and greater is distributed, in part, under and subject to the provisions of licenses for [https://raw.githubusercontent.com/GSEA-MSigDB/gsea-desktop/master/LICENSE-3RD-PARTY.txt a number of third-party libraries and components] used in its development.  
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            <td>[http://www.jidesoft.com Jide Software]</td>
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            <td>Java/Swing components</td>
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The MSigDB XML Browser v1.0 Beta is distributed, in part, under and subject to the provisions of licenses for  
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[https://raw.githubusercontent.com/GSEA-MSigDB/msigdb-xml-browser/master/LICENSE-3RD-PARTY.txt a number of third-party libraries and components] used in its development.
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            <td>[http://www.oracle.com/technetwork/java/index.html The Java 2 Platform]</td>
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            <td>Language that the GSEA desktop application is written in</td>
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GSEA gratefully acknowledges the
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            <td>[[image:duke.gif]]</td>
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[http://www.broadinstitute.org/gsea/msigdb/download_file.jsp?filePath=/resources/software/gsea2.x-3RD-PARTY-ACKNOWLEDGMENTS.txt listed components] used in the development of the v2.x code.
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            <td>[http://www.r-project.org/index.html The R programming language]</td>
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            <td>Language that the GSEAP-P-R is written in</td>
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            <td>[[image:Rlogo.jpg]]</td>
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            <td>[http://www.intellij.com/idea/ Intellij IDEA]</td>
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            <td>An awesome integrated development environment for Java</td>
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            <td>[[image:idea.png]]</td>
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            <td>[http://www.jgoodies.com/ JGoodies]</td>
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            <td>Forms layout and java look and feel</td>
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            <td></td>
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            <td>[http://foxtrot.sourceforge.net/docs/introduction.php foxtrot]</td>
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            <td>Java event handling mechanism for GUI's.</td>
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            <td></td>
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            <td>[http://www.dom4j.org/ dom4j]</td>
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            <td>XML Parser</td>
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            <td></td>
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            <td>[http://www.lowagie.com/iText/ itext]</td>
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            <td>Java PDF library</td>
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            <td>[[image:itext.gif]]</td>
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            <td>[http://jakarta.apache.org/poi/hssf/index.html Jakarta POI (especially HSSF)]</td>
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            <td>Java excel reporting</td>
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            <td>[[image: poi-logo.png]]</td>
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            <td>[http://www.object-refinery.com/jfreechart/ JFreeChart]</td>
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            <td>Graphing library for Java</td>
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            <td>[[image: jfreechart.png]]</td>
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            <td>[http://www.junit.org/index.htm JUnit]</td>
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            <td>Unit testing API</td>
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            <td>[[image: junit.gif]]</td>
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            <td>[http://jakarta.apache.org/log4j/docs/ log4j]</td>
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            <td>Logging toolkit for Java</td>
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            <td>[[image:log4j.jpg]]</td>
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            <td>[http://jakarta.apache.org/oro/ Oro]</td>
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            <td>Regular expressions library in Java</td>
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            <td>[[Image:Oro.logo.gif]]</td>
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            <td>[http://trove4j.sourceforge.net Trove]</td>
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            <td>High performance collections library from GNU</td>
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            <td></td>
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            <td>[http://jakarta.apache.org/ecs ECS]</td>
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            <td>Element construction set (a HTML tag library from Apache Jakarta</td>
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            <td>[[Image:Ecs-small.jpg]]</td>
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            <td>[http://home.snafu.de/tilman/xenulink.html Xenu link sleuth]</td>
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            <td>Website broken link checker</td>
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            <td>[[Image:Xenu_logo.png]]</td>
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Current revision as of 05:51, 22 August 2019

GSEA Home | Downloads | Molecular Signatures Database | Documentation | Contact

The GSEA Desktop v3.0 and greater is distributed, in part, under and subject to the provisions of licenses for a number of third-party libraries and components used in its development.

The MSigDB XML Browser v1.0 Beta is distributed, in part, under and subject to the provisions of licenses for a number of third-party libraries and components used in its development.

GSEA gratefully acknowledges the listed components used in the development of the v2.x code.

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