Difference between revisions of "Software Acknowledgements"

From GeneSetEnrichmentAnalysisWiki
Jump to navigation Jump to search
Line 9: Line 9:
 
     <tbody>
 
     <tbody>
 
         <tr style="height: 73.5pt;">
 
         <tr style="height: 73.5pt;">
             <td><a href="http://www.jidesoft.com">Jide Software</a></td>
+
             <td>[http://www.jidesoft.com Jide Software]</td>
 
             <td>Java/Swing components</td>
 
             <td>Java/Swing components</td>
 
             <td></td>
 
             <td></td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://www.oracle.com/technetwork/java/index.html">The Java 2 Platform</td>
+
             <td>[http://www.oracle.com/technetwork/java/index.html The Java 2 Platform]</td>
 
             <td>Language that the GSEA desktop application is written in</td>
 
             <td>Language that the GSEA desktop application is written in</td>
 
             <td>[[image:duke.gif]]</td>
 
             <td>[[image:duke.gif]]</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://www.r-project.org/index.html">The R programming language</a></td>
+
             <td>[http://www.r-project.org/index.html The R programming language]</td>
 
             <td>Language that the GSEAP-P-R is written in</td>
 
             <td>Language that the GSEAP-P-R is written in</td>
 
             <td>[[image:Rlogo.jpg]]</td>
 
             <td>[[image:Rlogo.jpg]]</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://www.intellij.com/idea/">Intellij IDEA</a></td>
+
             <td>[http://www.intellij.com/idea/ Intellij IDEA]</td>
 
             <td>An awesome integrated development environment for Java</td>
 
             <td>An awesome integrated development environment for Java</td>
 
             <td>[[image:idea.png]]</td>
 
             <td>[[image:idea.png]]</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://www.jgoodies.com/">JGoodies</a></td>
+
             <td>[http://www.jgoodies.com/ JGoodies]</td>
 
             <td>Forms layout and java look and feel</td>
 
             <td>Forms layout and java look and feel</td>
 
             <td></td>
 
             <td></td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://foxtrot.sourceforge.net/docs/introduction.php">foxtrot</a></td>
+
             <td>[http://foxtrot.sourceforge.net/docs/introduction.php foxtrot]</td>
 
             <td>Java event handling mechanism for GUI's.</td>
 
             <td>Java event handling mechanism for GUI's.</td>
 
             <td></td>
 
             <td></td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://www.dom4j.org/">dom4j</a></td>
+
             <td>[http://www.dom4j.org/ dom4j]</td>
 
             <td>XML Parser</td>
 
             <td>XML Parser</td>
 
             <td></td>
 
             <td></td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://www.lowagie.com/iText/">itext</a></td>
+
             <td>[http://www.lowagie.com/iText/ itext]</td>
 
             <td>Java PDF library</td>
 
             <td>Java PDF library</td>
 
             <td>[[image:itext.gif]]</td>
 
             <td>[[image:itext.gif]]</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://jakarta.apache.org/poi/hssf/index.html">Jakarta POI (especially HSSF)</a></td>
+
             <td>[http://jakarta.apache.org/poi/hssf/index.html Jakarta POI (especially HSSF)]</td>
 
             <td>Java excel reporting</td>
 
             <td>Java excel reporting</td>
 
             <td>[[image: poi-logo.png]]</td>
 
             <td>[[image: poi-logo.png]]</td>
 
         </tr>
 
         </tr>
 
         <tr style="height: 123pt;">
 
         <tr style="height: 123pt;">
             <td><a href="http://www.object-refinery.com/jfreechart/">JFreeChart</a></td>
+
             <td>[http://www.object-refinery.com/jfreechart/ JFreeChart]</td>
 
             <td>Graphing library for Java</td>
 
             <td>Graphing library for Java</td>
 
             <td>[[image: jfreechart.png]]</td>
 
             <td>[[image: jfreechart.png]]</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://www.junit.org/index.htm">JUnit</a></td>
+
             <td>[http://www.junit.org/index.htm JUnit]</td>
 
             <td>Unit testing API</td>
 
             <td>Unit testing API</td>
 
             <td>[[image: junit.gif]]</td>
 
             <td>[[image: junit.gif]]</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://jakarta.apache.org/log4j/docs/">log4j</a></td>
+
             <td>[http://jakarta.apache.org/log4j/docs/ log4j]</td>
 
             <td>Logging toolkit for Java</td>
 
             <td>Logging toolkit for Java</td>
 
             <td>[[image:log4j.jpg]]</td>
 
             <td>[[image:log4j.jpg]]</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://jakarta.apache.org/oro/">Oro</a></td>
+
             <td>[http://jakarta.apache.org/oro/ Oro]</td>
 
             <td>Regular expressions library in Java</td>
 
             <td>Regular expressions library in Java</td>
 
             <td>[[Image:Oro.logo.gif]]</td>
 
             <td>[[Image:Oro.logo.gif]]</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://trove4j.sourceforge.net">Trove</a></td>
+
             <td>[http://trove4j.sourceforge.net Trove]</td>
 
             <td>High performance collections library from GNU</td>
 
             <td>High performance collections library from GNU</td>
 
             <td></td>
 
             <td></td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://jakarta.apache.org/ecs">ECS</a></td>
+
             <td>[http://jakarta.apache.org/ecs ECS]</td>
 
             <td>Element construction set (a HTML tag library from Apache Jakarta</td>
 
             <td>Element construction set (a HTML tag library from Apache Jakarta</td>
 
             <td>[[Image:Ecs-small.jpg]]</td>
 
             <td>[[Image:Ecs-small.jpg]]</td>
 
         </tr>
 
         </tr>
 
         <tr>
 
         <tr>
             <td><a href="http://home.snafu.de/tilman/xenulink.html">Xenu link sleuth</a></td>
+
             <td>[http://home.snafu.de/tilman/xenulink.html Xenu link sleuth]</td>
 
             <td>Website broken link checker</td>
 
             <td>Website broken link checker</td>
 
             <td>[[Image:Xenu_logo.png]]</td>
 
             <td>[[Image:Xenu_logo.png]]</td>

Revision as of 03:29, 25 September 2016

GSEA Home | Downloads | Molecular Signatures Database | Documentation | Contact

GSEA implementations use many software tools and libraries, several of which are open source or freely available. Our thanks to their developers.

<tbody> </tbody>
Jide Software Java/Swing components
The Java 2 Platform Language that the GSEA desktop application is written in Duke.gif
The R programming language Language that the GSEAP-P-R is written in Rlogo.jpg
Intellij IDEA An awesome integrated development environment for Java Idea.png
JGoodies Forms layout and java look and feel
foxtrot Java event handling mechanism for GUI's.
dom4j XML Parser
itext Java PDF library Itext.gif
Jakarta POI (especially HSSF) Java excel reporting Poi-logo.png
JFreeChart Graphing library for Java Jfreechart.png
JUnit Unit testing API Junit.gif
log4j Logging toolkit for Java Log4j.jpg
Oro Regular expressions library in Java Oro.logo.gif
Trove High performance collections library from GNU
ECS Element construction set (a HTML tag library from Apache Jakarta Ecs-small.jpg
Xenu link sleuth Website broken link checker Xenu logo.png