Difference between revisions of "Software Acknowledgements"
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| − | <td><a href="http://www. | + | <td><a href="http://www.jidesoft.com">Jide Software</a></td> |
<td>Java/Swing components</td> | <td>Java/Swing components</td> | ||
<td></td> | <td></td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
| − | <td><a href=" | + | <td><a href="http://www.oracle.com/technetwork/java/index.html">The Java 2 Platform</td> |
<td>Language that the GSEA desktop application is written in</td> | <td>Language that the GSEA desktop application is written in</td> | ||
<td>[[image:duke.gif]]</td> | <td>[[image:duke.gif]]</td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
| − | <td><a href="http://www.r-project.org/index.html | + | <td><a href="http://www.r-project.org/index.html">The R programming language</a></td> |
<td>Language that the GSEAP-P-R is written in</td> | <td>Language that the GSEAP-P-R is written in</td> | ||
<td>[[image:Rlogo.jpg]]</td> | <td>[[image:Rlogo.jpg]]</td> | ||
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| − | <td><a href="http://www.jgoodies.com/ | + | <td><a href="http://www.jgoodies.com/">JGoodies</a></td> |
<td>Forms layout and java look and feel</td> | <td>Forms layout and java look and feel</td> | ||
<td></td> | <td></td> | ||
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<td>[[image: junit.gif]]</td> | <td>[[image: junit.gif]]</td> | ||
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| − | <td | + | <td><a href="http://jakarta.apache.org/log4j/docs/">log4j</a></td> |
| − | + | <td>Logging toolkit for Java</td> | |
| − | + | <td>[[image:log4j.jpg]]</td> | |
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| − | <tr | + | <tr> |
| − | <td | + | <td><a href="http://jakarta.apache.org/oro/">Oro</a></td> |
| − | + | <td>Regular expressions library in Java</td> | |
| − | + | <td>[[Image:Oro.logo.gif]]</td> | |
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<tr style="height: 64.5pt;"> | <tr style="height: 64.5pt;"> | ||
Revision as of 15:31, 16 October 2012
<a href="http://www.broadinstitute.org/gsea/">GSEA Home</a> |
<a href="http://www.broadinstitute.org/gsea/downloads.jsp">Downloads</a> |
<a href="http://www.broadinstitute.org/gsea/msigdb/">Molecular Signatures Database</a> |
<a href="http://www.broadinstitute.org/cancer/software/gsea/wiki/index.php/Main_Page">Documentation</a> |
<a href="http://www.broadinstitute.org/gsea/contact.jsp">Contact</a>
GSEA implementations use many software tools and libraries, several of which are open source or freely available. Our thanks to their developers.
<tbody> </tbody>| <a href="http://www.jidesoft.com">Jide Software</a> | Java/Swing components | |
| <a href="http://www.oracle.com/technetwork/java/index.html">The Java 2 Platform | Language that the GSEA desktop application is written in |  |
| <a href="http://www.r-project.org/index.html">The R programming language</a> | Language that the GSEAP-P-R is written in |  |
| <a href="http://www.intellij.com/idea/">Intellij IDEA</a> | An awesome integrated development environment for Java |  |
| <a href="http://www.jgoodies.com/">JGoodies</a> | Forms layout and java look and feel | |
| <a href="http://foxtrot.sourceforge.net/docs/introduction.php">foxtrot</a> | Java event handling mechanism for GUI's. | |
| <a href="http://www.dom4j.org/">dom4j</a> | XML Parser | |
| <a href="http://www.lowagie.com/iText/">itext</a> | Java PDF library |  |
| <a href="http://jakarta.apache.org/poi/hssf/index.html">Jakarta POI (especially HSSF)</a> | Java excel reporting |  |
| <a href="http://www.object-refinery.com/jfreechart/">JFreeChart</a> | Graphing library for Java |  |
| <a href="http://www.junit.org/index.htm">JUnit</a> | Unit testing API |  |
| <a href="http://jakarta.apache.org/log4j/docs/">log4j</a> | Logging toolkit for Java |  |
| <a href="http://jakarta.apache.org/oro/">Oro</a> | Regular expressions library in Java |  |
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Trove |
High performance collections library from GNU |
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ECS |
Element construction set (a HTML tag library from Apache <st1:place w:st="on"><st1:city w:st="on">Jakarta</st1:city></st1:place>) |
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Xenu link sleuth |
Website broken link checker |
