Somatic copy number variant discovery (CNVs)
Best Practices Workflows | Created 2018-01-07 | Last updated 2018-03-06

Comments (13)


Identify somatic copy number variant (CNVs) in a case sample. Requires an appropriate Panel of Normals (PON).

Reference Implementations

Pipeline Summary Notes Github FireCloud
Somatic CNV case sample Case BAM to CNV universal yes b37
Somatic CNV PON creation Normal BAMs to PON universal yes b37

Documentation for these workflows is in development.

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