The brand new 4.0 version of the GATK was released -- at long last! -- on Tuesday Jan 9, 2018.

In lieu of our traditional version highlights, for this release we have collected the following resources:

Coming soon: The GATK4 migration guide will detail the key differences at the level of tools and command lines that you should watch out for when you upgrade to using GATK4 in your own work.

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RT @dgmacarthur: We’re looking for a talented computational biologist to help drive the development of new methods for the diagnosis of rar…
21 Mar 18
@SeqComplete Please use the gatk wrapper script rather than calling the jars directly. Follow the quick start guide…
19 Mar 18
Join us on Tuesday March 20, we'll be talking about running #GATK4 pipelines on @BroadFireCloud, and how we optimiz…
16 Mar 18
#GATK Forums will be largely unattended today while we huddle for warmth and battle polar bears for food
13 Mar 18
@mikegloud @zaczap You could also come to one of our in-person workshops, we have a bunch coming up
9 Mar 18

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@gatk_dev We'll be happy to host a survival boot camp for you guys in Finland! Complementary polar bear provided.
13 Mar 18
@gatk_dev @ericschmidt Standardised, accessible, $5. Wow.
6 Mar 18
I am very grateful to the software from academia that "just works", like GATK, BWA, Picard, Bedtools, SAMtools, Kal…
3 Mar 18
@gatk_dev @BroadFireCloud @github We've been hacking GATK for years to play well with fish and butterflies! My enth…
23 Feb 18
@BroadFireCloud also does call caching!!!!!! Perfect for tinkering with multi-step pipelines.
23 Feb 18

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