If you encounter a broken link, please report it here.

To help us fix it, please tell us what is the link and what page you found it on.

Thank you!


jjmmii


Hi, I found this broken link http://www.broadinstitute.org/gatk/guide/workflows#variant_quality_score_recalibration on this page http://www.broadinstitute.org/gatk/guide/article?id=1268

Tue 6 Nov 2012

jjmmii


I think the correct link should be this one http://gatkforums.broadinstitute.org/discussion/39/variant-quality-score-recalibration

Tue 6 Nov 2012

h_manoj


Hi, I wanted to get more information about the DepthOfCoverage walker -- the link http://www.broadinstitute.org/gatk/gatkdocs/org_broadinstitute_sting_gatk_walkers_coverage_DepthOfCoverage.html is broken. Is there an alternate link with the details?

Tue 6 Nov 2012

Geraldine_VdAuwera


@jjmmii, thanks for the report. The link has been fixed. @h_manoj, thanks, we're aware of this broken link. There is currently no alternate for that content, but you can find key information to use the tool [here](http://www.broadinstitute.org/gatk/guide/article?id=40) and [here](https://github.com/broadgsa/gatk/blob/master/public/java/src/org/broadinstitute/sting/gatk/walkers/coverage/DepthOfCoverage.java).

Tue 6 Nov 2012

dickinsw


Is the ftp server running? (ftp.broadinstitute.org) Trying to download GATK lite; request times out, unable to ping server. Regards

Tue 6 Nov 2012

Geraldine_VdAuwera


Sorry to get back to you so late, @dickinsw, I was in holiday-induced hibernation. We've had a few minor hiccups in server performance; should be all better now, but let us know if you experience any further problems.

Tue 6 Nov 2012




- Recent posts


- Upcoming events

See Events calendar for full list and dates


- Recent events

See Events calendar for full list and dates



- Follow us on Twitter

GATK Dev Team

@gatk_dev

It's official: GATK 4.0 will be released Jan 9, 2018 https://t.co/e76tduFJKk
16 Oct 17
GATK events and workshops update https://t.co/cnn39FPBzY
13 Oct 17
RT @BroadGenomics: Join our @WDL_dev & @gatk_dev teams to learn more on reproducible workflows! #ASHG17 https://t.co/qt6nypKSLc
13 Oct 17
We're excited to be part of this evening workshop demoing the GATK4 WDL pipelines! https://t.co/ScyNqIvmsl
6 Oct 17
I added a video to a @YouTube playlist https://t.co/JhzxN3INZ9 MPG Primer: High throughput sequencing and variant calling pipelines
6 Oct 17

- Our favorite tweets from others

Although it made me cry sometimes, I owe them a lot and love them much more. https://t.co/vUj0cBllgn
16 Oct 17
Round of applause at #BOSC2017 for GATK4 being open sourced. https://t.co/WRhTeKtKTX
23 Jul 17
Round of applause for @Katewanders - Broad Institute will open source data science tools from now on https://t.co/CvLhwgBQUK #BOSC2017
23 Jul 17
The @gatk_dev team, that delivered an excellent "GATK Best Practices for Variant Discovery" workshop this week, on… https://t.co/Z8GNduuDeJ
20 Jul 17
Amazing session @edgenome with @gatk_dev comes to an end. Enriched learning! Thx #gatk #gatk2017 #Genomics #Edinburgh #Bioinformatics
19 Jul 17
See more of our favorite tweets...