Here is a Dropbox link to the presentations given at the Dec 4-5 GATK workshop:

https://www.dropbox.com/sh/0puyz82ecswm4ig/V2fW--1ZFS


Geraldine_VdAuwera


Here is the link to the XHMM presentation: http://db.tt/ljmY7MrG

Tue 4 Dec 2012

njolstad


Well presented and thanks for the slides - seems very useful for my future work.

Tue 4 Dec 2012

HarryPotter87


Thank you for the slides, Geraldine_VdAuwera. I'm reading them in order to learn GATK. What is the reference genome for the tutorial (.fa) and where can i download it? I tried with http://hgdownload.cse.ucsc.edu/goldenPath/hg19/chromosomes/ (chr 20), but it doesn't seem to work. Thank you very much again.

Tue 4 Dec 2012

Geraldine_VdAuwera


You can find the files in our the resources bundle on our FTP server; see instructions here: http://www.broadinstitute.org/gatk/guide/article?id=1213

Tue 4 Dec 2012




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