Heads up, cancer researchers! Appistry (our commercial licensing partner for GATK and now MuTect) is announcing an upcoming webinar on best practices for somatic mutation studies using GATK and MuTect. Registration for the webinar is open to all (not just Appistry customers) so be sure to sign up for this. See the announcement on Appistry's website for more detailed information.

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GATK Dev Team


Broad's Data Science group is hosting "API, Portals, and JIRA - Oh my!" a Write The Docs Meetup Tues 11/1 at 6pm https://t.co/BFT0MT9Vdr
28 Oct 16
@hoffsbeefs Yes, multithreading can explain some marginal differences. For purely deterministic behavior, it should be disabled.
25 Oct 16
@hoffsbeefs Yes it should be deterministic, given same data, same parameters and no multithreading.
25 Oct 16
RT @BroadGenomics: Missed #GATK WKSP at #ASHG16? 10am meet Geraldine at booth 329 - Broad’s GATK Guru @gatk_dev #BroadGenomicsExperts https…
20 Oct 16
RT @NJL_NGS: Broad Institute Workbench workshop now at #ashg16. https://t.co/t6L452mp8a
19 Oct 16

Our favorite tweets from others

Had a really nice time in Vancouver at #ASHG16, also known as "The @dgmacarthur Lab Meeting"
24 Oct 16
Real motivation behind gnomAD: all of you have now learnt the proper capitalization of ExAC, and we felt you needed a new challenge. #ASHG16
20 Oct 16
Asked a question, speaker jokes not to edit your BAM header and expect GATK to let you get away with it.
19 Oct 16
My new hobby: finding incomprehensible diagrams on office whiteboards and adding alarming conclusions to them https://t.co/7RAzBF0kYh
30 Sep 16
I've easily written my first custom ReadFilter for GATK. The @gatk_dev 's toolkit is a great example of programming.
21 Sep 16
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