The presentation slides are available on DropBox at this link:

After the workshop, these materials as well as the hands-on tutorial will be posted in the Presentations section of the website.


The materials that we will use for the hands-on session are in the GSA FTP tutorials bundle, in the `workshop` directory: []( All files are required except for those in the `intermediates` directory. If you have a good connection, you can download them too and use them in case you have trouble, but if not don't worry about it.

Wed 25 Jun 2014

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GATK Dev Team


Upcoming #GATK events in July : UK workshops and BOSC 17
24 Jun 17
@VinceBattista Which package /URL are you trying that is not working?
20 Jun 17
@RemiMarenco Java 1.8 is supported already in GATK 3.7 -- but yes GATK4 will support it, as well as OpenJDK.
1 Jun 17
RT @dgmacarthur: Get in on the ground floor with an amazing team building software that's already transforming genomic analysis. https://t.…
26 May 17
I added a video to a @YouTube playlist GATK4: speed optimizations, new tools, and open source licensing
26 May 17

- Our favorite tweets from others

Getting started with #GoogleCloud and learnt that #Cromwell + #WDL by @broadinstitute is just awesome. Go #GATK
13 Jun 17
Thanks you @gatk_dev team for making GATK v4 open source! #Bioinformatics #Genomics
5 Jun 17
Huge thanks to the @gatk_dev team: they return to BSD license (! Watch out for the #GATK package in #Bioconda!
26 May 17
This is great GATK @gatk_dev 4 open source (again), BSD3! 💯
25 May 17
Wooow, really exiting and cheerful news! Will load it up on our server for sure! Congrats @gatk_dev
25 May 17
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