Showing docs for version 3.6-0 | The latest version is 4.1.4.0


VariantType

General category of variant

Category Annotation Modules

VCF Field INFO (variant-level)

Header definition line
  • INFO=<ID=VariantType,Number=1,Type=String,Description="Variant type description">

  • Overview

    This annotation assigns a roughly correct category of the variant type (SNP, MNP, insertion, deletion, etc.). It also specifies whether the variant is multiallelic (>2 alleles).


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    See also GATK Documentation Index | Tool Docs Index | Support Forum

    GATK version 3.6-0-g89b7209 built at 2017/02/09 12:52:48.