Showing tool doc from version 4.0.4.0 | The latest version is 4.1.4.1

ReadLengthEqualsCigarLengthReadFilter

Filter out reads where the read and CIGAR do not match in length

Category Read Filters


Overview

Filter out reads where the read and CIGAR do not match in length.

Note: unmapped reads pass this filter. See MappedReadFilter for criteria defining an unmapped read.

Additional references

See these additional references.


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GATK version 4.0.4.0 built at 23-40-2018 11:40:56.