Showing tool doc from version 4.0.4.0 | The latest version is 4.1.2.0

SecondOfPairReadFilter

Keep only paired reads that are second of pair

Category Read Filters


Overview

Keep only paired reads (0x1) that are second of pair (0x80).

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GATK version 4.0.4.0 built at 23-40-2018 11:40:56.