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GATK Dev Team

@gatk_dev

@iskander @NJL_NGS Treat them like any other read, no special handling. Problems arise in CIGAR functions that don’t know how to handle Ns.
7 Dec 16
@iskander @NJL_NGS By default we error out. Possible to override using -U ALLOW_N_CIGAR_READS but tool may crash. Is unsupported usage.
7 Dec 16
RT @geoffjentry: How @WDL_dev empowers a biochemist w/o programming background to perform large scale genomics analyses: https://t.co/BxAnK
6 Dec 16

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