Difference between revisions of "Release Notes"
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<td><strong>Description</strong></td> | <td><strong>Description</strong></td> | ||
<td><strong>Release Notes</strong></td> | <td><strong>Release Notes</strong></td> | ||
| + | </tr> | ||
| + | <tr> | ||
| + | <td>Sep 2022</td> | ||
| + | <td>4.3.<em>x</em>*<br /> | ||
| + | </td> | ||
| + | <td>Support for the new Mouse MSigDB database and versioning scheme changes. | ||
| + | </td> | ||
| + | <td>[[GSEA_v4.3.x_Release_Notes|wiki]]</td> | ||
| + | </tr> | ||
| + | <tr> | ||
| + | <td>Dec 2021 - Jan 2022</td> | ||
| + | <td>4.2.<em>x</em><br /> | ||
| + | </td> | ||
| + | <td>New metric (Spearman) and new collapse mode (Absolute Max), better handling of missing values and many other fixes. Updated to latest Log4J jars to avoid concerns of vulnerabilities in earlier Log4J versions.<br /> | ||
| + | </td> | ||
| + | <td>[[GSEA_v4.2.x_Release_Notes|wiki]]</td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
<td>Jul 2020</td> | <td>Jul 2020</td> | ||
| − | <td>4.1.<em>x</em> | + | <td>4.1.<em>x</em><br /> |
</td> | </td> | ||
<td>Improved support for macOS Catalina, updated and improved Enrichment Reports, and numerous bug fixes<br /> | <td>Improved support for macOS Catalina, updated and improved Enrichment Reports, and numerous bug fixes<br /> | ||
| Line 76: | Line 92: | ||
<td><strong>Release Notes</strong></td> | <td><strong>Release Notes</strong></td> | ||
</tr> | </tr> | ||
| + | <tr valign="top> | ||
| + | <td>Mar 2023</td> | ||
| + | <td> 2023.2.Hs*</td> | ||
| + | <td>Update to Ensembl 110 gene annotation data. Miscellaneous collection updates<br> | ||
| + | <td><span class="plainlinks">[https://docs.gsea-msigdb.org/#MSigDB/Release_Notes/MSigDB_2023.2.Hs/ New Docs Site]</span> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr valign="top> | ||
| + | <td>Mar 2023</td> | ||
| + | <td> 2023.2.Mm*</td> | ||
| + | <td>Update to Ensembl 110 gene annotation data. Miscellaneous collection updates<br> | ||
| + | <td><span class="plainlinks">[https://docs.gsea-msigdb.org/#MSigDB/Release_Notes/MSigDB_2023.2.Mm/ New Docs Site]</span> | ||
| + | </td> | ||
| + | </tr> | ||
| + | <tr valign="top> | ||
| + | <td>Mar 2023</td> | ||
| + | <td> 2023.1.Hs*</td> | ||
| + | <td>Update to Ensembl 109 gene annotation data. Miscellaneous collection updates<br> | ||
| + | <td>[[MSigDB_v2023.1.Hs_Release_Notes|wiki]]</td> | ||
| + | </tr> | ||
| + | <tr valign="top> | ||
| + | <td>Mar 2023</td> | ||
| + | <td> 2023.1.Mm*</td> | ||
| + | <td>Update to Ensembl 109 gene annotation data. Miscellaneous collection updates<br> | ||
| + | <td>[[MSigDB_v2023.1.Mm_Release_Notes|wiki]]</td> | ||
| + | </tr> | ||
| + | <tr valign="top> | ||
| + | <td>Sep 2022</td> | ||
| + | <td> 2022.1.Hs</td> | ||
| + | <td>Human MSigDB under a new versioning scheme<br> | ||
| + | <td>[[MSigDB_v2022.1.Hs_Release_Notes|wiki]]</td> | ||
| + | </tr> | ||
| + | <tr valign="top> | ||
| + | <td>Sep 2022</td> | ||
| + | <td> 2022.1.Mm</td> | ||
| + | <td>Initial release of Mouse MSigDB<br> | ||
| + | <td>[[MSigDB_v2022.1.Mm_Release_Notes|wiki]]</td> | ||
| + | </tr> | ||
| + | <tr valign="top> | ||
| + | <td>Jan 2022</td> | ||
| + | <td> 7.5</td> | ||
| + | <td><br> | ||
| + | <td>[[MSigDB_v7.5_Release_Notes|wiki]]</td> | ||
| + | </tr> | ||
| + | <tr valign="top> | ||
| + | <td>Mar 2021</td> | ||
| + | <td> 7.4</td> | ||
| + | <td><br> | ||
| + | <td>[[MSigDB_v7.4_Release_Notes|wiki]]</td> | ||
| + | </tr> | ||
| + | <tr valign="top> | ||
| + | <td>Mar 2021</td> | ||
| + | <td> 7.3</td> | ||
| + | <td>C2:CP:WikiPathways +15; C2:CP:Reactome +15; C3:GTRD +175 (bugfix); C5:GO -88; C5:HPO +319; C7:VAX (new sub-collection); C8: +333<br> | ||
| + | <td>[[MSigDB_v7.3_Release_Notes|wiki]]</td> | ||
| + | </tr> | ||
<tr valign="top> | <tr valign="top> | ||
<td>Sep 2020</td> | <td>Sep 2020</td> | ||
| − | <td> 7.2 | + | <td> 7.2</td> |
| − | <td><br> | + | <td>C2:CGP +60; C2:CP:WikiPathways (new sub-collection); C2:CP:Reactome +22; C3:GTRD -176; C5:GO +79, C5:HPO (new sub-collection); C8: +51 (promoted from supplementary)<br> |
<td>[[MSigDB_v7.2_Release_Notes|wiki]]</td> | <td>[[MSigDB_v7.2_Release_Notes|wiki]]</td> | ||
</tr> | </tr> | ||
Latest revision as of 14:55, 20 October 2023
GSEA Home |
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Contact
GSEA Software Release Notes
| Date | Release | Description | Release Notes |
| Sep 2022 | 4.3.x* |
Support for the new Mouse MSigDB database and versioning scheme changes. | wiki |
| Dec 2021 - Jan 2022 | 4.2.x |
New metric (Spearman) and new collapse mode (Absolute Max), better handling of missing values and many other fixes. Updated to latest Log4J jars to avoid concerns of vulnerabilities in earlier Log4J versions. |
wiki |
| Jul 2020 | 4.1.x |
Improved support for macOS Catalina, updated and improved Enrichment Reports, and numerous bug fixes |
wiki |
| Aug 2019 - Nov 2019 | 4.0.x |
Updates for MSigDB 7.0, Java 11 compatibility, and better performance |
wiki |
| Jul 2017 | 3.0 |
Open source release, with numerous improvements and bug fixes |
wiki |
| Mar 2015 - Apr 2017 | 2.2.x |
|
wiki |
| Jun 2014 | 2.1.0 | Added Enrichment Map visualization of GSEA results | wiki |
| Jan 2007 - Jan 2014 | 2.0.x |
|
wiki |
| Mar 2005 | 1.0 | Initial release |
MSigDB Release Notes
| Date | Release | Description | Release Notes |
| Mar 2023 | 2023.2.Hs* | Update to Ensembl 110 gene annotation data. Miscellaneous collection updates | New Docs Site |
| Mar 2023 | 2023.2.Mm* | Update to Ensembl 110 gene annotation data. Miscellaneous collection updates | New Docs Site |
| Mar 2023 | 2023.1.Hs* | Update to Ensembl 109 gene annotation data. Miscellaneous collection updates | wiki |
| Mar 2023 | 2023.1.Mm* | Update to Ensembl 109 gene annotation data. Miscellaneous collection updates | wiki |
| Sep 2022 | 2022.1.Hs | Human MSigDB under a new versioning scheme | wiki |
| Sep 2022 | 2022.1.Mm | Initial release of Mouse MSigDB | wiki |
| Jan 2022 | 7.5 | wiki | |
| Mar 2021 | 7.4 | wiki | |
| Mar 2021 | 7.3 | C2:CP:WikiPathways +15; C2:CP:Reactome +15; C3:GTRD +175 (bugfix); C5:GO -88; C5:HPO +319; C7:VAX (new sub-collection); C8: +333 | wiki |
| Sep 2020 | 7.2 | C2:CGP +60; C2:CP:WikiPathways (new sub-collection); C2:CP:Reactome +22; C3:GTRD -176; C5:GO +79, C5:HPO (new sub-collection); C8: +51 (promoted from supplementary) | wiki |
| Mar 2020 | 7.1 | C2 (+28); C3 (+2904); C5(+196) | wiki |
| Aug 2019 | 7.0 | C1 (-27); C2 (+738); C5 (+4079); | wiki |
| Jul 2018 | 6.2 | C2 (+24) Mapping between v6.2 and v6.1 gene sets |
wiki |
| Oct 2017 | 6.1 | C2 (+7) Mapping between v6.1 and v6.0 gene sets |
wiki |
| Apr 2017 | 6.0 | C2 (+2); C5 (-249) | wiki |
| Oct 2016 | 5.2 | C2 (+4); C5 (+4,712) Mapping between v5.2 and v5.1 gene sets |
wiki |
| Jan 2016 | 5.1 | C2 (+1); C7 (+2,962) | wiki |
| Mar 2015 | 5.0 | H (+50); C2 (+3) Mapping between v5.0 and v4.0 gene sets |
wiki |
| May 2013 | 4.0 | C2 (-128); C7 (+1,910) | wiki |
| Oct 2012 | 3.1 | C2 (+1,578); C4 (-23); C6 (+189) Mapping between v3.0 and v3.1 gene sets |
wiki |
| Sept 2010 | 3.0 | C1 (-60); C2 (+1,380); C3 (-1); C4 (-2) Mapping between v2.5 and v3.0 gene sets |
wiki |
| April 2008 | 2.5 | C2 (+205); C4 (+456); C5 (+1454) |
wiki |
| Feb 2007 | 2.1 | Minor updates to MSigDB v2.0 annotations | |
| Jan 2007 | 2.0 | C1 (updated); C2 (+269); C3 (+214) Mapping between v1 and v2 gene sets |
wiki |
| Nov 2005 | 1.1 | C1 (updated); C2 (+350); C3 (+566); C4 |
|
| March 2005 | 1.0 | Initial release |
Web site Release Notes
| Date | Release | Description | Release Notes |
| Aug 2019 | 6.4* | Upgrades to support v7.0 MSigDB. | wiki |
| Apr 2017 | 6.0 | Upgrades to support v6.0 MSigDB. | |
| Mar 2015 | 5.0 | Upgrades to support v5.0 MSigDB. | |
| Jun 2014 | 4.05 | Several minor updates | |
| Apr 2013 | 3.87 | Several bug fixes and new functionality. | wiki |
| Oct 2012 | 3.84 | Several updates and new functionality. | |
| Jan 2011 | 3.5 | Several bug fixes and some new functionality. | wiki |
- Current release
