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  • New Page
    36 bytes (4 words) - 14:28, 30 July 2010
  • Main Page
    ...run from the [http://www.broadinstitute.org/gsea/downloads.jsp Downloads] page. The [http://www.broadinstitute.org/gsea/doc/GSEAUserGuideFrame.html User G ...aded from the [http://www.broadinstitute.org/gsea/downloads.jsp Downloads] page. See [http://software.broadinstitute.org/gsea/doc/GSEAUserGuideTEXT.htm#_Ru
    4 KB (663 words) - 20:18, 3 March 2023
  • New Page To Test DB Fix
    ...software/gsea/doc/GSEAUserGuideFrame.html?Browse_MSigDB_Page Browse MSigDB page] to browse gene sets and display gene set cards. <br /> ...ion of the gene. This is the description that appears on the Browse MSigDB page of the GSEA application.<br />
    5 KB (804 words) - 10:48, 15 December 2008

Page text matches

  • Quick reference
    Load Data page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Load_Data_Page]<br Run GSEA page: [http://wwwdev.broad.mit.edu/gsea/doc/GSEAUserGuide.htm#Run_GSEA_Page]<br
    2 KB (246 words) - 13:38, 12 January 2007
  • Web site v3.4 Release Notes
    ...o tiers of collections were shown on the Browse Collections page; now this page shows three tiers of collections, including the CP subcollections</li> ...that caused a 404 error when trying to compute overlaps from the gene set page</li>
    1 KB (160 words) - 14:23, 13 August 2019
  • Documentation Home
    This page is intentionally left blank. See [[Main_Page|Documentation Home]]
    75 bytes (11 words) - 14:56, 23 July 2010
  • Cls
    This page intentionally left blank. See the GSEA User Guide.<br />
    253 bytes (38 words) - 14:21, 16 January 2007
  • MSigDB collections
    ...software.broadinstitute.org/gsea/msigdb/collections.jsp MSigDB Collections page] on the main website.
    474 bytes (65 words) - 21:02, 5 April 2017
  • License info
    ...tp://software.broadinstitute.org/gsea/license_terms_list.jsp License Terms page] on the main website.
    469 bytes (66 words) - 21:01, 5 April 2017
  • MSigDB License
    ...tp://software.broadinstitute.org/gsea/license_terms_list.jsp License Terms page] on the main website.
    468 bytes (66 words) - 21:00, 5 April 2017
  • MSigDB Acknowledgements
    See the page [http://software.broadinstitute.org/gsea/msigdb/collection_details.jsp MSig
    512 bytes (69 words) - 21:04, 5 April 2017
  • Web site v6.4 Release Notes
    ...dex.php/GSEA_v4.0.x_Release_Notes GSEA 4.0.x], including updated Downloads page, gene set pages, and documentation.</li> ...software.broadinstitute.org/gsea/msigdb/annotate.jsp Investigate Gene Sets page] now use a more constrained set of namespaces for the symbol conversion pro
    2 KB (257 words) - 13:54, 16 October 2019
  • New Page To Test DB Fix
    ...software/gsea/doc/GSEAUserGuideFrame.html?Browse_MSigDB_Page Browse MSigDB page] to browse gene sets and display gene set cards. <br /> ...ion of the gene. This is the description that appears on the Browse MSigDB page of the GSEA application.<br />
    5 KB (804 words) - 10:48, 15 December 2008
  • GSEA v2.0.2 Release Notes
    ...available from the [http://www.broad.mit.edu/gsea/downloads.jsp Downloads] page of the GSEA web site.<br /> ...red files from the [http://www.broad.mit.edu/gsea/downloads.jsp Downloads] page of the GSEA web site and have the scripts reference the downloaded files. A
    1 KB (176 words) - 03:14, 25 September 2016
  • Web site v3.87 Release Notes
    ...itute.org/gsea/msigdb/help_annotations.jsp#overlap| Compute Overlaps Help] page.</li> ...itute.org/gsea/msigdb/help_annotations.jsp#overlap| Compute Overlaps Help] page</li>
    2 KB (253 words) - 14:24, 13 August 2019
  • Gene Set Pages
    ...tute.org/gsea/doc/GSEAUserGuideFrame.html?Browse_MSigDB_Page Browse MSigDB page] to browse gene sets and display gene set pages. </p> <p>Each gene set page contains the following information:</p>
    4 KB (692 words) - 03:20, 25 September 2016
  • Windows Launching Issues
    ...A 4.0.0]] and the Windows installer EXE that it offers. For now this wiki page will be left here for reference purpose, however, for any users still launc ...ut that further updates may affect them in the future. We will update the page should new issues come up. </p>
    7 KB (1,195 words) - 01:57, 22 August 2019
  • MSigDB v6.0 Release Notes
    <p>This page describes the changes made to the gene set collections for Release 6.0 of t ...ttp://software.broadinstitute.org/gsea/license_terms_list.jsp License Term page] for details.</p>
    3 KB (422 words) - 12:19, 10 April 2017
  • MSigDB v2.5 Release Notes
    <p>This page describes the changes made to the gene set collections for Release 2.5 of t ...[http://www.broad.mit.edu/gsea/msigdb/collections.jsp Browse Collections] page.<br />
    4 KB (601 words) - 03:37, 25 September 2016
  • 1010
    .../www.broad.mit.edu/gsea/doc/GSEAUserGuideFrame.html?Run_GSEA_Page Run GSEA Page] in the <em style="">GSEA User Guide</em>.
    945 bytes (145 words) - 13:03, 12 January 2007
  • 1011
    .../www.broad.mit.edu/gsea/doc/GSEAUserGuideFrame.html?Run_GSEA_Page Run GSEA Page] in the <em style="">GSEA User Guide</em>.
    882 bytes (133 words) - 18:02, 18 December 2007
  • 1006
    .../www.broad.mit.edu/gsea/doc/GSEAUserGuideFrame.html?Run_GSEA_Page Run GSEA Page] in the <em style="">GSEA User Guide</em>.<br />
    1,021 bytes (163 words) - 13:01, 12 January 2007
  • Main-Update
    ...run from the [http://www.broadinstitute.org/gsea/downloads.jsp Downloads] page. The [http://www.broadinstitute.org/gsea/doc/GSEAUserGuideFrame.html User G ...aded from the [http://www.broadinstitute.org/gsea/downloads.jsp Downloads] page. See [http://www.broadinstitute.org/gsea/doc/GSEAUserGuideTEXT.htm#_Running
    4 KB (577 words) - 18:32, 24 April 2019
  • Mapping between v6.2 and v6.1 gene sets
    <p>This page shows the corrected names of gene sets MSigDB v6.2 and the former name in v
    3 KB (611 words) - 23:05, 16 July 2018
  • GSEA v2.0.1 Release Notes
    <li>GSEA Run page includes a scroll bar to keep the <em>Run </em>button visible regardless of
    1,004 bytes (152 words) - 03:13, 25 September 2016
  • MSigDB v6.1 Release Notes
    <p>This page describes the changes made to the gene set collections for Release 6.1 of t
    1 KB (182 words) - 12:58, 18 October 2017
  • Mapping between v5.0 and v4.0 gene sets
    <p>This page only includes gene sets from v4.0 with direct counterparts in v5.0, or sets
    2 KB (397 words) - 12:06, 6 October 2016
  • Main Page
    ...run from the [http://www.broadinstitute.org/gsea/downloads.jsp Downloads] page. The [http://www.broadinstitute.org/gsea/doc/GSEAUserGuideFrame.html User G ...aded from the [http://www.broadinstitute.org/gsea/downloads.jsp Downloads] page. See [http://software.broadinstitute.org/gsea/doc/GSEAUserGuideTEXT.htm#_Ru
    4 KB (663 words) - 20:18, 3 March 2023
  • GSEA v2.0.3 Release Notes
    ...unch GSEA from the [http://www.broad.mit.edu/gsea/downloads.jsp Downloads] page. If you have questions, please contact us at: [mailto:gsea@broad.mit.edu gs
    1 KB (208 words) - 03:49, 25 September 2016
  • MSigDB XML description
    ...ers) and annotation about the gene sets in a given release of MSigDB. This page describes the tags and attributes of the XML file. <br /> <td>URL of the original source page of the gene set</td>
    6 KB (808 words) - 10:49, 2 May 2017
  • MSigDB v2022.1 Release Notes
    This page describes updates made to the Molecular Signatures Database for release 202
    1 KB (232 words) - 15:04, 22 August 2022
  • MSigDB v5.2 Release Notes
    <p>This page describes the changes made to the gene set collections for Release 5.2 of t ...[http://www.broad.mit.edu/gsea/msigdb/collections.jsp Browse Collections] page.
    5 KB (797 words) - 12:44, 13 October 2016
  • MSigDB v2022.1.Mm Release Notes
    This page describes updates made to the Molecular Signatures Database for release 202 ...sea-msigdb.org/gsea/msigdb/mouse/collection_details.jsp Collection Details Page]</span> for collection-specific general information.
    6 KB (857 words) - 18:20, 7 September 2022
  • Known Issues
    ...[http://www.broadinstitute.org/gsea/downloads.jsp Downloads] page of the GSEA web site and choose the option with larger number for memory al ...o to the [http://www.broadinstitute.org/gsea/downloads.jsp GSEA Downloads] page</li>
    10 KB (1,626 words) - 03:50, 25 September 2016
  • MSigDB v3.0 Release Notes
    ...://www.broad.mit.edu/gsea/msigdb/collections.jsp">Browse Collections</a> page.&nbsp; ...te.org/cancer/software/gsea/wiki/index.php/Msigdb_mapping_v2.5_to_v3">this page</a> for information about MSigDB 2.5 gene sets that have been renamed, ret
    13 KB (2,142 words) - 03:10, 25 September 2016
  • MSigDB v7.1 Release Notes
    This page describes the changes made to the gene set collections for Release 7.1 of t ...g/gsea/msigdb/collection_details.jsp#MIRDB MIRDB subset collection details page]
    8 KB (1,270 words) - 11:47, 28 August 2020
  • MSigDB v4.0 Release Notes
    ...available at [http://www.broadinstitute.org/gsea/downloads.jsp Downloads] page. You can view them through the MSigDB Browser tool in the GSEA desktop appl
    3 KB (405 words) - 03:11, 25 September 2016
  • MSigDB v7.3 Release Notes
    ...ation response gene sets provided by [https://www.immuneprofiling.org/hipc/page/show the Human Immunology Project Consortium] among other minor updates and ...sets curated from the literature by [https://www.immuneprofiling.org/hipc/page/show the Human Immunology Project Consortium (HIPC)]. These sets describe t
    8 KB (1,260 words) - 17:49, 1 April 2021
  • R-GSEA Readme
    ...ownloads_archive.jsp Archived Downloads] page. Note that the R program was last updated in 2005 and may not work as-is with modern R releases. It is made a One page R scripts to run the examples described in the paper:<br>
    7 KB (1,220 words) - 16:29, 28 August 2019
  • MSigDB v6.2 Release Notes
    <p>This page describes the changes made to the gene set collections for Release 6.2 of t
    5 KB (793 words) - 11:31, 12 July 2018
  • Using GSEA v3.0 Features
    ...v3.0 to save this timestamp value into the 'Comments' section of the main page of the HTML Report. By setting this value for the random seed in a new ana ...stitute.org/GENE-E/ GENE-E] among other options. See our [[Data formats]] page for details.
    7 KB (1,142 words) - 23:18, 1 July 2017
  • FAQ
    ...broadinstitute.org/gsea/doc/GSEAUserGuideFrame.html?Run_GSEA_Page Run GSEA Page] in the <em style="">GSEA User Guide</em>.</p> ...ute.org/gsea/doc/GSEAUserGuideFrame.html?_GSEAPreranked_Page GSEAPreranked Page] in the <em style="">GSEA User Guide</em>.</p>
    42 KB (6,944 words) - 19:05, 12 November 2021
  • MSigDB v5.0 Release Notes
    ...available at [http://www.broadinstitute.org/gsea/downloads.jsp Downloads] page. You can view them through the MSigDB Browser tool in the GSEA desktop appl
    4 KB (628 words) - 03:12, 25 September 2016
  • Mapping between v6.1 and v6.0 gene sets
    <p>This page shows the corrected names of gene sets in the C3 collection in MSigDB v6.1,
    12 KB (1,854 words) - 12:53, 18 October 2017
  • MSigDB v7.4 Release Notes
    This page describes the changes made to the gene set collections for Release 7.4 of t
    4 KB (698 words) - 21:59, 1 April 2021
  • MSigDB v2023.1.Mm Release Notes
    This page describes updates made to the Molecular Signatures Database Mouse Collectio
    5 KB (786 words) - 17:19, 6 April 2023
  • MSigDB v2023.1.Hs Release Notes
    This page describes updates made to the Molecular Signatures Database Human Collectio
    6 KB (869 words) - 17:18, 6 April 2023
  • GSEA v3.0 Release Notes
    .... See the [http://software.broadinstitute.org/gsea/downloads.jsp Downloads page]. Another option for investigating genesets is the online MSigDB browser ww
    6 KB (900 words) - 22:24, 1 July 2017
  • MSigDB v2022.1.Hs Release Notes
    This page describes updates made to the Molecular Signatures Database for release 202
    9 KB (1,342 words) - 02:30, 13 September 2022
  • MSigDB v3.1 Release Notes
    ...available at [http://www.broadinstitute.org/gsea/downloads.jsp Downloads] page. You can view them through the MSigDB Browser tool in the GSEA desktop appl
    7 KB (1,040 words) - 03:10, 25 September 2016
  • MSigDB v7.2 Release Notes
    This page describes the changes made to the gene set collections for Release 7.2 of t
    7 KB (1,064 words) - 15:19, 16 February 2021
  • MSigDB SQLite Database
    ...r [http://www.gsea-msigdb.org/gsea/msigdb_license_terms.jsp License Terms] page for more info.</li> ...milar candidate gene sets and exclude the others. MSigDB’s online gene set page of a selected gene set includes information about any related candidate gen
    22 KB (3,463 words) - 19:49, 28 April 2023
  • MSigDB v7.5.1 Release Notes
    This page describes the changes made to the gene set collections for Release 7.5.x of
    9 KB (1,370 words) - 18:14, 15 September 2023
  • Mapping between v5.2 and v5.1 gene sets
    <p>This page only includes gene sets from v5.1 with direct counterparts in v5.2, or sets
    61 KB (11,931 words) - 18:51, 7 October 2016
  • Mapping between v3.1 and v3.0 gene sets
    <p>This page only includes gene sets from v3.0 with direct counterparts in v3.1, or sets
    45 KB (7,443 words) - 17:27, 11 October 2012
  • MSigDB v7.0 Release Notes
    This page describes the changes made to the gene set collections for Release 7.0 of t
    22 KB (3,591 words) - 16:47, 30 March 2020
  • Msigdb mapping v2.5 to v3
    <p><span style="font-size: 12pt;">This page only includes gene sets from v2.5 with direct counterparts in v3.0, or that <tr height="13" style="page-break-before: always;">
    275 KB (29,823 words) - 03:09, 25 September 2016
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